Pairwise Alignments

Query, 365 a.a., Ribose operon repressor from Variovorax sp. SCN45

Subject, 339 a.a., LacI family transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  215 bits (547), Expect = 2e-60
 Identities = 121/330 (36%), Positives = 190/330 (57%), Gaps = 7/330 (2%)

Query: 6   DVALQAEVSVTTVSHVVNDTRHVSAKVRERVELAIRELGYVPNAMARSLKSNTTSTLGML 65
           DVA  A VSV TVS V+N +  VS ++R R+E AI  +GY  NA+ARSLK  TT T+G++
Sbjct: 3   DVAKAAHVSVATVSAVINGSAPVSPELRNRIEQAIGLIGYKRNAIARSLKLGTTRTVGLM 62

Query: 66  IPNSSNPYFAEIVRIVEDRCFGAGYTLVLCNTDDEPHRQSVYLQVLAERRIDGLIVVLTG 125
           + + +NP+F ++V +++D    AGY ++LC  D++   Q   + +L +R +DGLI+    
Sbjct: 63  VADITNPFFTDVVAVIQDVLHRAGYAVMLCCNDEDVALQDEQIALLIDRSVDGLII--AP 120

Query: 126 TGDDDALVKQLHGLRVPTVLVDREIADPACDLVETAHMQGGLLAVRHLLSLGHKRIACIG 185
            GDD+ L + +    +PTVL+DR       D V   + +    A  ++L LGH+RI  I 
Sbjct: 121 AGDDETLKRMIASANLPTVLIDRLCDGIDTDAVVLDNRRAVQDATIYMLGLGHRRIGYIS 180

Query: 186 GQAGVMPSEQRIEGWRMALAEAGATPDIANGDALLWRGGFTSQGGYEAMHAILRTERKPS 245
           G        +R+ G+R AL  AG   +    + L+  G F  +  Y A   +L +  +P+
Sbjct: 181 GSLDTSTGRERLAGYRAALEAAGLPCE----EDLIRIGNFREKDAYTAALQLLTSPERPT 236

Query: 246 AVFVCNDLMAIGALRAAHESGVRVPDDLSIVGFDDIELSAYTSPPLTTVAQPKERIGAMA 305
           A+F  N+LM IG ++A  + G+  PDD+S+  FDD   +    P LTT+AQP + IG  A
Sbjct: 237 AIFSANNLMVIGVMKAIRDIGLHCPDDVSVASFDDFPWADVFQPHLTTIAQPVQAIGEQA 296

Query: 306 VDMLLEQMGGKRRDA-RKVVLQPELRVRAS 334
             ++L+++ G   +A R++VLQ  L +R S
Sbjct: 297 AQLVLDRLSGASPEAPRRLVLQGRLVIRDS 326