Pairwise Alignments

Query, 365 a.a., Ribose operon repressor from Variovorax sp. SCN45

Subject, 334 a.a., smc22-r protein from Sinorhizobium meliloti 1021

 Score =  182 bits (462), Expect = 1e-50
 Identities = 127/325 (39%), Positives = 175/325 (53%), Gaps = 20/325 (6%)

Query: 1   MATIKDVALQAEVSVTTVSHVVNDTRHVSAKVRERVELAIRELGYVPNAMARSLKSNTTS 60
           M TI  VA +A VS+TTVSHV+N    VSA++R RVE+AI ELGYVPN  A+SL++  T+
Sbjct: 1   MTTIAKVAKRAGVSLTTVSHVLNHADRVSAEMRRRVEVAIAELGYVPNPQAQSLRTGRTN 60

Query: 61  TLGMLIPNSSNPYFAEIVRIVEDRCFGAGYTLVLCNTD------DEPHRQSVYLQVLAER 114
            + MLIP+  NP++ E+V+  +      G  L++ NTD       E  RQ  YL+ +  R
Sbjct: 61  LVAMLIPDIRNPFYPELVKAAQSDLQAMGLDLLIFNTDVPGGHSQEHSRQ--YLRHIRNR 118

Query: 115 RIDGLIVVLTGTGD-DDALVKQLHGLRVPTVLVDREIADPACDLVETAHMQGGLLAVRHL 173
           RIDGLIV      D  DAL+    G+ VPTV +  ++ + A D V+     GG     +L
Sbjct: 119 RIDGLIVGDFALHDMHDALI----GIDVPTVFIG-DLPNAAVDSVKIDDFGGGYQMGAYL 173

Query: 174 LSLGHKRIACIGGQAGVMPSEQRIEGWRMALAEAGATPDIANGDALLWRGGFTSQGGYEA 233
              GHKRIA + G +    +  R  G+   L + G  P +A    L   G + S  G EA
Sbjct: 174 AKRGHKRIAHVTGPSFFAEAMARAAGFEQGLRDHGVEP-LAE---LRREGTYLSPSGREA 229

Query: 234 MHAILRT--ERKPSAVFVCNDLMAIGALRAAHESGVRVPDDLSIVGFDDIELSAYTSPPL 291
           +  +L T  +  PS VF  N LMA GA+   H+ GVR+PDD+SI  F D     Y  P +
Sbjct: 230 VEWLLATSGDHLPSVVFFGNFLMAAGAIAEFHDRGVRIPDDVSIAVFGDQPQLEYVRPRI 289

Query: 292 TTVAQPKERIGAMAVDMLLEQMGGK 316
             V      +   A  MLLE++ G+
Sbjct: 290 ARVGNTPSLLAHRATAMLLERLSGE 314