Pairwise Alignments

Query, 365 a.a., Ribose operon repressor from Variovorax sp. SCN45

Subject, 333 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  194 bits (493), Expect = 3e-54
 Identities = 126/336 (37%), Positives = 187/336 (55%), Gaps = 16/336 (4%)

Query: 4   IKDVALQAEVSVTTVSHVVNDTRHVSAKVRERVELAIRELGYVPNAMARSLKSNTTSTLG 63
           IKD+A +A VSV TVS  +  +  V+A+ R+RV    REL Y PN  AR+L++  + T+ 
Sbjct: 7   IKDIAEKAGVSVATVSRALAASTLVTAETRQRVLDLARELDYRPNVSARNLRTRRSMTVL 66

Query: 64  MLIPNSSNPYFAEIVRIVEDRCFGAGYTLVLCNTDDEPHRQSVYLQVLAERRIDGLIVV- 122
           M++ +  NP++ +I++ VE     AGY +++ NT+++P R++ Y  +L +   DG+I++ 
Sbjct: 67  MVVRDVGNPFYLDILKGVEATAREAGYAVLMGNTENDPARETEYFSMLRDGHADGMILMT 126

Query: 123 --LTGTGDDDALVKQLHGLRVPTVLVDREIADPACDLVETAHMQGGLLAVRHLLSLGHKR 180
             L   GD + L         P V+    I       V+  ++     AV+HL+SLGH+R
Sbjct: 127 GKLPSAGDWNHL---------PVVVALEMIEGSGLPHVQVDNVAAARGAVQHLISLGHRR 177

Query: 181 IACIGGQAGVMPSEQRIEGWRMALAEAGATPDIANGDALLWRGGFTSQGGYEAMHAILRT 240
           IA I G      S  R EG+R+A+ +AG T  I  G  +  RG F  + G E   ++   
Sbjct: 178 IAHISGPVPEPMSVYRREGFRLAMRDAGLT--IPAGYEV--RGDFLIESGEECCRSLFSL 233

Query: 241 ERKPSAVFVCNDLMAIGALRAAHESGVRVPDDLSIVGFDDIELSAYTSPPLTTVAQPKER 300
              P+A+FV ND MA GA+      G  VP D+S+VGFDD+ LS    PPLTTV QP+  
Sbjct: 234 SDPPTALFVANDEMAYGAVHELRRIGRDVPGDVSVVGFDDLYLSKAFYPPLTTVGQPRSE 293

Query: 301 IGAMAVDMLLEQMGGKRRDARKVVLQPELRVRASTA 336
           IG  A+ +LL  + G    A  +VL   L+VR STA
Sbjct: 294 IGRTAMAVLLGILAGGSEVAEPIVLPTVLKVRGSTA 329