Pairwise Alignments

Query, 365 a.a., Ribose operon repressor from Variovorax sp. SCN45

Subject, 340 a.a., DNA-binding transcriptional regulator GalS from Klebsiella michiganensis M5al

 Score =  170 bits (431), Expect = 5e-47
 Identities = 116/339 (34%), Positives = 177/339 (52%), Gaps = 10/339 (2%)

Query: 1   MATIKDVALQAEVSVTTVSHVVNDTRHVSAKVRERVELAIRELGYVPNAMARSLKSNTTS 60
           M TI+DVA QA VSV TVS V+N++  VS   RE V  A+  LGY PNA A++L +  + 
Sbjct: 1   MITIRDVARQAGVSVATVSRVLNNSALVSPDTREAVMKAVSLLGYRPNANAQALATQVSD 60

Query: 61  TLGMLIPNSSNPYFAEIVRIVEDRCFGAGYTLVLCNTDDEPHRQSVYLQVLAERRIDGLI 120
           T+G+++ + S+ +F  +V+ V+         +++ N+  E  ++   ++VL  +R   LI
Sbjct: 61  TIGVVVMDVSDAFFGALVKAVDTVAQQHHKYVLIGNSYHEAEKERNAIEVLIRQRCSALI 120

Query: 121 VVLTGTGDDDA--LVKQLHGLRVPTVLVDREIADPACDLVETAHMQGGLLAVRHLLSLGH 178
           V      D +    ++ + G+    VL++R +   A   V   ++ G L+A R LL+ GH
Sbjct: 121 VHSKALSDAELGDFMEHMPGM----VLINRIVPGYAHRCVGLDNVSGALMATRMLLNHGH 176

Query: 179 KRIACIGGQAGVMPSEQRIEGWRMALAEAGATPDIANGDALLWRGGFTSQGGYEAMHAIL 238
           +RI  +    G+   + R EGW  AL E G    I   ++ +  G    QGG  AM  +L
Sbjct: 177 QRIGYLSSNHGIEDDDLRREGWFRALHEHG----IVAPESWVGSGSPDMQGGEAAMVELL 232

Query: 239 RTERKPSAVFVCNDLMAIGALRAAHESGVRVPDDLSIVGFDDIELSAYTSPPLTTVAQPK 298
                 +AVF  ND MA GAL    ++G+ VP  LS++GFDDI +S YT P LTTV  P 
Sbjct: 233 GRNLGLTAVFAYNDSMAAGALTTLKDNGIAVPQHLSLIGFDDIPISRYTDPQLTTVRYPI 292

Query: 299 ERIGAMAVDMLLEQMGGKRRDARKVVLQPELRVRASTAR 337
             +  +A ++ L+   GK          P L  R S A+
Sbjct: 293 MSMAKLATELALQGAAGKLDREASHCFMPTLVRRHSVAQ 331