Pairwise Alignments

Query, 616 a.a., Putative protease from Variovorax sp. SCN45

Subject, 587 a.a., PDZ/DHR/GLGF from Synechococcus elongatus PCC 7942

 Score =  345 bits (884), Expect = 4e-99
 Identities = 214/574 (37%), Positives = 304/574 (52%), Gaps = 39/574 (6%)

Query: 5   APVRRSAAAVAAPVAGVRFRVECADLHARLFGVTLTI-DAPAARQRVSLPVWIPGSYLVR 63
           AP    + A+AA  +G+ +RV   +    LF VTL I D  +    V +P W PGSYL+R
Sbjct: 4   APAAADSLAIAA--SGLTYRVALPNPSNHLFEVTLQISDWQSEIVTVQMPAWTPGSYLLR 61

Query: 64  EFAKNLQGLRATQGRRKPTL-TQLDKCSWLVECTPGQPLVLNYQVCAYDNSVRTAWLDAE 122
           E+A++LQ  RA     +P L  +L K +W +E      + ++YQV A + +VRT  LD  
Sbjct: 62  EYARHLQNFRAQTATGQPLLWRKLRKNAWQIETQEHSEIYISYQVLATELTVRTNHLDRS 121

Query: 123 RGFFNGTSVCLRVEGQTDAPHALEIVAPVLADDAPRWSCATALVPLKADRHGFGSYQAAG 182
            GFF   ++CL ++   D P  +EI AP        W+ ATAL  +         ++AA 
Sbjct: 122 HGFFTPAALCLYIDAWRDRPCQVEIKAP------EGWNVATALPAI-----AHNCFRAAD 170

Query: 183 YDELADSPVEMGAFWSAEFEACGVPHRFVVAGAAASFDGDRLIADTKAICEAEMRFWHGD 242
           +D L DSP E+G   + EF   G  H +   G   + D DRL+ADT  + E E   + G 
Sbjct: 171 FDTLVDSPFEIGPEGTQEFTVLGKKHYWRTWGG--NLDSDRLLADTARLIETEAAIFGG- 227

Query: 243 KAGKRGGPKLPIDRYVFMLNAVDDGYGGLEHRHSTALICNRRDLPQRGEKKKQPEGYTTL 302
                    LP D Y F+L+    GYGGLEHR ST L  +R+ + +       PEGY   
Sbjct: 228 ---------LPYDHYWFILHLSSGGYGGLEHRDSTVLAFDRQAITE-------PEGYRRF 271

Query: 303 MGLISHEYFHTWNVKRMRPGEFARYDYSQENYTQLLWFFEGFTSYYDDLLLRRAGRIDDA 362
           + L++HE+FH WNVKR+RP    ++DY  ENYT  LWF EG TSYYD LL  RAG     
Sbjct: 272 LQLVAHEFFHLWNVKRIRPKALEQFDYEAENYTPSLWFSEGATSYYDLLLPLRAGLYGVD 331

Query: 363 AYLRLLNKTINQVMQTPGRLVQPVADASFDAWVKYYRQDEQTPNSTVSYYTKGALVALCF 422
           ++L  L K +++ + TPGR VQP+A++SFDAWVK YR+D  + N  +SYY KG LV    
Sbjct: 332 SFLEALGKDLSRYLTTPGRKVQPLAESSFDAWVKLYRRDAYSDNQQMSYYLKGQLVCWLL 391

Query: 423 DLTLR-HEGKGTLDDVMRHLWTHGGGGP---ISEADIAAALEAVSGRSYAVELARWVHST 478
           DL +R H+   + DDV+R LW   G GP     EA++      V+G        R+V   
Sbjct: 392 DLEIRNHQPDRSFDDVLRLLWQRHGQGPEIGFEEAELRQIFSEVAGVDLTDFFERYVDGL 451

Query: 479 EELPLAQLLRAHGVATLEDPSQQAQALGLRVAEANGSVQVKVVLRGGPAEKAGFSANDEW 538
           EELP+A  + + G+  L     +  + GLR+A+  G  Q+K V    PAE+AG    DE 
Sbjct: 452 EELPIAAAVDSLGLQLLPQGCDR-PSHGLRLADEQGRCQIKFVASDSPAEQAGLMIGDEI 510

Query: 539 IGIELPAVGKRGQQRPAQAWRIAKLDDLALYLGD 572
           + +    V      R    ++  ++ +L ++  D
Sbjct: 511 VALNGLRVSADNFSRRLATYQAGQVLELTIFHDD 544