Pairwise Alignments

Query, 386 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 317 a.a., diguanylate cyclase (GGDEF domain) with PAS/PAC sensor from Pseudomonas fluorescens FW300-N2E2

 Score =  105 bits (262), Expect = 2e-27
 Identities = 67/191 (35%), Positives = 107/191 (56%), Gaps = 15/191 (7%)

Query: 203 VLLLSISVILMATDR-----VHTEFEYMATRDSLTGALNRRALLDACRGAFASDRRH--- 254
           + L+   V  +AT+R      + + + +++ D LTG  NR       + A+A  +R+   
Sbjct: 127 ICLVIYDVTDVATNRHQLQAANAQLQLLSSTDRLTGLYNRGHWESDLKAAYARHQRYGHA 186

Query: 255 MALLMVDLDHFKAVNDRFGHQMGDKVLREAVRRMQRAVGDAGVLGRYGGEEFVVLLPGTG 314
           ++L+M+D+DHFK VND +GHQ GDKV+ +  R ++    D+ V+GRYGGEEF V+L  T 
Sbjct: 187 LSLVMLDIDHFKRVNDTYGHQAGDKVIEQVARLLREHARDSDVVGRYGGEEFGVVLSDTD 246

Query: 315 KVEAMAIAARLKQAIG--EPFAPDSPMAEVGSIAVSIGVA-ASDGGRGVDEVLARADAAL 371
              A A A R++ ++   E    D  +       +S+GVA  S       +++ARAD AL
Sbjct: 247 SSGAHAFAERMRHSVEALEVLYNDQTI----RFTISLGVADLSQPSNDHADLIARADQAL 302

Query: 372 YKAKAMGRDQV 382
           Y +K  GR++V
Sbjct: 303 YTSKKTGRNRV 313