Pairwise Alignments

Query, 386 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 424 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  105 bits (261), Expect = 3e-27
 Identities = 62/163 (38%), Positives = 82/163 (50%), Gaps = 5/163 (3%)

Query: 221 EFEYMATRDSLTGALNRRALLDACRGAFASDRR---HMALLMVDLDHFKAVNDRFGHQMG 277
           E E +A  D LTG  NR A             R    + +LM+DLDHFK++ND FGH+ G
Sbjct: 247 ELEKLAYTDGLTGIANRSAFFSRAEAELRKSHRLSYDVGILMLDLDHFKSINDTFGHEAG 306

Query: 278 DKVLREAVRRMQRAVGDAGVLGRYGGEEFVVLLPGTGKVEAMAIAARLKQAIGEPFAPDS 337
           D VL+     +   + +  + GR GGEEF +L+PGT K    A+A RLK A+       S
Sbjct: 307 DNVLKLVADTISTCLREIDMFGRVGGEEFAILVPGTDKFGMQALAERLKSAVSN--TDVS 364

Query: 338 PMAEVGSIAVSIGVAASDGGRGVDEVLARADAALYKAKAMGRD 380
            +     I+VSIG         +   L RAD  LY AK  GR+
Sbjct: 365 FLDAEKKISVSIGYTKIYPNESLKSALKRADENLYSAKRNGRN 407