Pairwise Alignments

Query, 260 a.a., 3-hydroxyacyl-CoA dehydrogenase [isoleucine degradation] (EC 1.1.1.35) from Variovorax sp. SCN45

Subject, 255 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  224 bits (572), Expect = 1e-63
 Identities = 134/262 (51%), Positives = 159/262 (60%), Gaps = 9/262 (3%)

Query: 1   MQLDSSIAAVVTGGASGLGAATARRLAGHGVKVALFDLNAEQGEALARELGGV--FCKVD 58
           MQL S +  +VTG +SGLGAA  R LA  G  V   DL    GE  A ELG    F   D
Sbjct: 1   MQLKSRVF-IVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNAD 59

Query: 59  VTSEEQVDAAFAKARAAHGQERVLVNCAGTGNAVKTASRDKATGEIKHFPLANFDRIIQI 118
           VT+E    AA A A+   G    LVNCAGT      A  +K  G      L +F R + +
Sbjct: 60  VTNEADATAALAFAKQEFGHVHGLVNCAGT------APGEKILGRSGPHALDSFARTVAV 113

Query: 119 NLVGTFRCIAKSAAGMLTLDMLQDGERGAIVNTASVAAQDGQMGQAAYTASKAGIVGMTL 178
           NL+GTF  I  +A  M   +   DGERG IVNTAS+AA DGQ+GQAAY ASK G+  +TL
Sbjct: 114 NLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTL 173

Query: 179 PIARDLMSEGIRVNTILPGIFDTPLLQGAPDNVKAALAASVPFPKRLGNPAEYATLAELM 238
           P AR+L   GIRV TI PGIFDTP++ G P +V+ ALAASVPFP RLG   EYA L + +
Sbjct: 174 PAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPPRLGRAEEYAALVKHI 233

Query: 239 ITNGYFNGESVRLDGAIRMAPR 260
             N   NGE +RLDGA+RMAPR
Sbjct: 234 CENTMLNGEVIRLDGALRMAPR 255