Pairwise Alignments

Query, 519 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 563 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) from Pseudomonas stutzeri RCH2

 Score =  227 bits (578), Expect = 1e-63
 Identities = 144/492 (29%), Positives = 245/492 (49%), Gaps = 41/492 (8%)

Query: 48  MRPGDRVGMMSLNSHRFVEYFFGTWWGGGVINPVNIRWNPKEVAYSLDDCDTRILLVDDV 107
           ++PGDR+ +   N  ++    FG    G ++   N  +  +E+ +  +D   + L+    
Sbjct: 72  LQPGDRIAVQLPNLIQYPIVVFGAMRAGLIVVNTNPLYTAREMEHQFNDAGAKALVCLAN 131

Query: 108 FAPMAAELRGLSSSLRTVV------------------------YCGDGAVPEGMVGYEAL 143
            A +A E+   +     V+                             ++P+ +   +AL
Sbjct: 132 MAHLAEEVLPKTGIKHVVITEVADMLPPLKRMLVNAVVKHVKKMVPAYSLPKAVKLNDAL 191

Query: 144 -LAATDPAEDAPHDSDELAAVMYTGGTTGQPKGVMLTHGSLCINALGTVAALPRDTQDAA 202
            L    P  +A   SD++A + YTGGTTG  KG MLTH ++  N L   A +  +  D +
Sbjct: 192 ALGRGKPVREALPKSDDVAVLQYTGGTTGVAKGAMLTHRNIVANMLQCKALMGSNLNDGS 251

Query: 203 AIVAAPM--FHVAGCGVALQSLMRLVPVHVVPVF---DELAVLRTLQSARITEMFLVPTM 257
            ++ AP+  +H+        ++M L   H + +    D  A+++ L   R +    + T+
Sbjct: 252 EVLIAPLPLYHIYAFTFHCMAMM-LSGNHNILISNPRDLPAMIKDLGKYRFSGFVGLNTL 310

Query: 258 IKRVIEHPRFAEFDLSSLRLLSYGAAPIDAALLDQAMRAFPGTAFAQVYGMTELSPVVTA 317
              +     F + D S+L++   G   +  A  ++  +   G    + YG+TE SPV + 
Sbjct: 311 FVALCNSEDFRKLDFSALKVTLSGGMALQLATAER-WKQVTGCPICEGYGLTETSPVASV 369

Query: 318 LPSHCHAPGPDRERLLRSAGTPIPIAELRIVDGDDNEVPFGQVGEIVARGPMVMKGYWNK 377
                    P     L S G P+P  + ++++ D  ++  G++GE+  +GP VMKGYW +
Sbjct: 370 --------NPIEHIQLGSIGIPVPSTQFKVINDDGQDLAQGEIGELCIKGPQVMKGYWQR 421

Query: 378 PKETEAALRG-GWMHTGDGGYMDEEGFVFVVDRMKDMIVSGGENVYSAEVENAIAQLPQV 436
           P+ T+  +   GW  TGD G + E+G++ +VDR KDMI+  G NVY  E+E+ +A LP V
Sbjct: 422 PEATDEVIDAQGWFKTGDIGVIQEDGYIRIVDRKKDMILVSGFNVYPNELEDVLASLPGV 481

Query: 437 LMSAVIGVPDDKWGERVHAVIVRREGMALEAEAVIAHCREQIAGYKCPRSVEFRDALPLS 496
           L SA IGVPD+K GE +   +V + G +L  E V+ H  + + GYK P++VEFRD+LP +
Sbjct: 482 LQSAAIGVPDEKSGEAIKLFVVVKPGESLTKEQVMQHMHDNLTGYKRPKAVEFRDSLPTT 541

Query: 497 AAGKLQKFQLRE 508
             GK+ + +LR+
Sbjct: 542 NVGKILRRELRD 553