Pairwise Alignments

Query, 354 a.a., Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12) from Variovorax sp. SCN45

Subject, 350 a.a., Holliday junction DNA helicase, RuvB subunit from Pseudomonas stutzeri RCH2

 Score =  466 bits (1200), Expect = e-136
 Identities = 235/341 (68%), Positives = 282/341 (82%), Gaps = 3/341 (0%)

Query: 14  RVVSAAPASPNEEAIERALRPKLLDEYVGQAKVREQLEIFIGAARKRKEALDHVLLFGPP 73
           R+V+A  +   +E ++RA+RP  L EY+GQ  VREQ+++FI AA+ R+EALDH L+FGPP
Sbjct: 6   RIVTAG-SRDRDEQLDRAIRPLKLAEYIGQPVVREQMDLFIRAAKGRQEALDHTLIFGPP 64

Query: 74  GLGKTTLSHIIAAELGVNLRQTSGPVLEKPKDLAALLTNLEPNDVLFIDEIHRLSPVVEE 133
           GLGKTTL++IIA E+GV+++ TSGPVLE+P DLAALLTNLE  DVLF+DEIHRLSP+VEE
Sbjct: 65  GLGKTTLANIIAEEMGVSIKSTSGPVLERPGDLAALLTNLEAGDVLFVDEIHRLSPIVEE 124

Query: 134 ILYPALEDYQIDIMIGEGPAARSIKLDLQPFTLVGATTRAGMLTNPLRDRFGIVARLEFY 193
           +LYPA+ED+Q+DIMIGEGPAARSIKLDL PFTLVGATTRAGMLTNPLRDRFGIV RLEFY
Sbjct: 125 VLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQRLEFY 184

Query: 194 TPEELALIVRRSAGLLKVETDAAGGFEIARRSRGTPRIANRLLRRVRDYAEVKGNGRITE 253
           + E+LA IV RSA +L + T+  G FEIARR+RGTPRIANRLLRRVRD+AEV+G G IT 
Sbjct: 185 STEDLATIVSRSASILGLPTEPEGAFEIARRARGTPRIANRLLRRVRDFAEVRGRGEITR 244

Query: 254 DIAHKALAMLDVDPQGFDLMDRKLLEAVIHRFDGGPVGLDNVAASIGEERDTIEDVIEPY 313
            IA  AL MLDVD +GFD  DR+LL  +I +FDGGPVG+D++AA+I EER TIEDV+EPY
Sbjct: 245 QIADLALNMLDVDERGFDHQDRRLLLTLIEKFDGGPVGIDSLAAAISEERHTIEDVLEPY 304

Query: 314 LIQQGYLQRTPRGRIATLAAYRHLGVAPPSGRGD--VPDLF 352
           LIQQGY+ RTPRGR+ T  AY H G+  P   GD   PDLF
Sbjct: 305 LIQQGYIMRTPRGRVVTRHAYLHFGLNLPKRMGDAPTPDLF 345