Pairwise Alignments

Query, 354 a.a., Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12) from Variovorax sp. SCN45

Subject, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

 Score =  461 bits (1185), Expect = e-134
 Identities = 230/316 (72%), Positives = 271/316 (85%)

Query: 24  NEEAIERALRPKLLDEYVGQAKVREQLEIFIGAARKRKEALDHVLLFGPPGLGKTTLSHI 83
           +EE I+RA+RPK L +Y GQ  VR+Q+EIFI AA+ R+EALDH+L+FGPPGLGKTTL++I
Sbjct: 17  DEEVIDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGPPGLGKTTLANI 76

Query: 84  IAAELGVNLRQTSGPVLEKPKDLAALLTNLEPNDVLFIDEIHRLSPVVEEILYPALEDYQ 143
           +A E+GVN+R TSGPVLEK  DLAALLTNLE NDVLFIDEIHRLSP+VEE+LYPA+EDYQ
Sbjct: 77  VANEMGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRLSPMVEEVLYPAMEDYQ 136

Query: 144 IDIMIGEGPAARSIKLDLQPFTLVGATTRAGMLTNPLRDRFGIVARLEFYTPEELALIVR 203
           +DIMIGEGPAARSIK+DL PFTL+GATTRAG LT+PLRDRFGIV RLE+Y   +L  IV+
Sbjct: 137 LDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEYYKVADLQHIVQ 196

Query: 204 RSAGLLKVETDAAGGFEIARRSRGTPRIANRLLRRVRDYAEVKGNGRITEDIAHKALAML 263
           RSA  L +  D+ G  E+ARR+RGTPRIANRLLRRVRDYAEVKG+G I    A +AL ML
Sbjct: 197 RSAQCLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKGDGHICAQTADRALNML 256

Query: 264 DVDPQGFDLMDRKLLEAVIHRFDGGPVGLDNVAASIGEERDTIEDVIEPYLIQQGYLQRT 323
           DVD QGFD MDRKLL A++ +F GGPVG+DN+AA+IGEE+DTIEDV+EP+LIQQGYLQRT
Sbjct: 257 DVDHQGFDYMDRKLLLAIMEKFSGGPVGIDNLAAAIGEEKDTIEDVLEPFLIQQGYLQRT 316

Query: 324 PRGRIATLAAYRHLGV 339
           PRGRIAT  AY H G+
Sbjct: 317 PRGRIATDRAYLHFGI 332