Pairwise Alignments

Query, 354 a.a., Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12) from Variovorax sp. SCN45

Subject, 375 a.a., Holliday junction DNA helicase B from Synechococcus elongatus PCC 7942

 Score =  384 bits (987), Expect = e-111
 Identities = 196/338 (57%), Positives = 250/338 (73%), Gaps = 1/338 (0%)

Query: 12  PQRVVSAAPASPNE-EAIERALRPKLLDEYVGQAKVREQLEIFIGAARKRKEALDHVLLF 70
           PQ  +    A+P E +  E  +RP+ L +Y+GQ ++++ L I I AA+ R+E+LDH+LL+
Sbjct: 27  PQDSLVRPQAAPEESQRPEDQIRPQRLADYIGQPELKDVLGIAIAAAKSRQESLDHLLLY 86

Query: 71  GPPGLGKTTLSHIIAAELGVNLRQTSGPVLEKPKDLAALLTNLEPNDVLFIDEIHRLSPV 130
           GPPGLGKTT++ ++A E+GV  R T+ P LE+P+D+  LL NL+P DVLFIDEIHRL  V
Sbjct: 87  GPPGLGKTTMALVLATEMGVQCRITTAPALERPRDIVGLLVNLQPGDVLFIDEIHRLPKV 146

Query: 131 VEEILYPALEDYQIDIMIGEGPAARSIKLDLQPFTLVGATTRAGMLTNPLRDRFGIVARL 190
            EEILYPA+ED+++DI IG+G +AR+  + LQPFTLVGATT+ G LT+PLRDRFG+V RL
Sbjct: 147 TEEILYPAMEDFRLDITIGKGQSARTRSITLQPFTLVGATTQIGALTSPLRDRFGLVQRL 206

Query: 191 EFYTPEELALIVRRSAGLLKVETDAAGGFEIARRSRGTPRIANRLLRRVRDYAEVKGNGR 250
            FY  E L  IV+R+A LL    D AG  EIA+RSRGTPRIANRLLRRVRDYA VK  G 
Sbjct: 207 RFYEVEALTDIVQRTARLLNTPLDQAGAEEIAKRSRGTPRIANRLLRRVRDYAAVKAPGP 266

Query: 251 ITEDIAHKALAMLDVDPQGFDLMDRKLLEAVIHRFDGGPVGLDNVAASIGEERDTIEDVI 310
           IT  IA  AL + +VDP G D  DR+LL  +I  F GGPVGL+ +AA+ GE+  T+E+V 
Sbjct: 267 ITGAIAATALELYNVDPCGLDWTDRRLLSHLIENFGGGPVGLETLAAATGEDAQTVEEVY 326

Query: 311 EPYLIQQGYLQRTPRGRIATLAAYRHLGVAPPSGRGDV 348
           EPYL+Q GYLQRTPRGR+AT AA+RHLG  PP   G +
Sbjct: 327 EPYLLQIGYLQRTPRGRVATPAAWRHLGYEPPQASGQL 364