Pairwise Alignments

Query, 354 a.a., Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12) from Variovorax sp. SCN45

Subject, 436 a.a., recombination factor protein RarA from Sinorhizobium meliloti 1021

 Score = 55.1 bits (131), Expect = 3e-12
 Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 20/164 (12%)

Query: 5   TDDFAP-VPQRVVSAAPASPNEEAIERALRPKLLDEYVGQAKVREQLEIFIGAARKR--K 61
           +D FAP  P  + SA P +         LRP+ L E  GQ    E L    G   +    
Sbjct: 2   SDLFAPHEPPEIASARPLADR-------LRPRTLAEVTGQ----EHLTGPDGVLTRMIAS 50

Query: 62  EALDHVLLFGPPGLGKTTLSHIIAAELGVNLRQTSG-----PVLEKPKDLAALLTNLEPN 116
            +L  ++ +GPPG GKTT++ +++ E G+   Q S        L+K  + A         
Sbjct: 51  GSLGSMIFWGPPGTGKTTVARLLSGEAGLAFEQISAIFSGVADLKKVFESARARRMSGRQ 110

Query: 117 DVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSIKLD 160
            +LF+DEIHR +   ++   P +ED  + I++G      S +L+
Sbjct: 111 TLLFVDEIHRFNRAQQDSFLPVMEDGTV-ILVGATTENPSFELN 153