Pairwise Alignments

Query, 354 a.a., Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12) from Variovorax sp. SCN45

Subject, 436 a.a., AAA ATPase central domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 62.0 bits (149), Expect = 3e-14
 Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 8/148 (5%)

Query: 18  AAPASPNEEAIERALRPKLLDEYVGQAKVREQLEIFIGAARKRKEALDHVLLFGPPGLGK 77
           AAP       +   LRP  L E +GQ  +    +  +GA    + AL  V+ +GPPG+GK
Sbjct: 10  AAPPDDGPRPLADRLRPAHLSEVIGQDHLLGP-DGPLGAMLANR-ALSSVIFWGPPGVGK 67

Query: 78  TTLSHIIAAELGVNLRQTSG-----PVLEKPKDLAALLTNLEPNDVLFIDEIHRLSPVVE 132
           TT++ ++AAE  +   Q S      P L K  + A L        +LF+DEIHR +   +
Sbjct: 68  TTIARLLAAETDLAFVQISAIFTGVPDLRKVFEAARLRRQGGQGTLLFVDEIHRFNKAQQ 127

Query: 133 EILYPALEDYQIDIMIGEGPAARSIKLD 160
           +   P +ED  I +++G      S +L+
Sbjct: 128 DGFLPHMEDGTI-VLVGATTENPSFELN 154