Pairwise Alignments

Query, 354 a.a., no description from Variovorax sp. SCN45

Subject, 361 a.a., outer membrane protein (porin) from Dechlorosoma suillum PS

 Score =  130 bits (328), Expect = 4e-35
 Identities = 107/369 (28%), Positives = 172/369 (46%), Gaps = 23/369 (6%)

Query: 1   MKKTVAAGLVLAAYSSLTPAQSSVTIYGTVDLYMAF---AKSGITSSK--RLEDGGQTAS 55
           M+K   A  V A  S    AQS+V +YG  D  +A    A +G T+ +  R + G  + S
Sbjct: 1   MQKKFIALAVAALASGAAFAQSNVQVYGVADFGLAVNGSALNGTTTGQNTRFDSGIASGS 60

Query: 56  RLGFRGTEDLGGGLSAHFTLESGFAPDTGNGTLPGPAMSFSRQSFVGLSGPWGQIDAGRM 115
           RLGF+GTEDLG GL A F  E G   D G         +F RQS+VGL+G +G +  GR+
Sbjct: 61  RLGFKGTEDLGNGLKALFNFEMGLTLDDGASA---QGRTFGRQSYVGLTGGFGTVIGGRI 117

Query: 116 YTPMFYTLFKADPYGVNSVFSPINLVAATDAQPGLTPFAARASNMIRYRTPASSDFFADI 175
           YTP +  + + DP+GV +     NL A++    GL     R +N + Y +P+ S      
Sbjct: 118 YTPHYTLMAQIDPFGVGTAGRANNLFASSSLAAGLYD-PIRVNNTVAYVSPSFSGLSVTA 176

Query: 176 AYAPG-----ESSAPSHQSGNFYGGSLGWSRKPYYIAYAFQRAR-SGSA--SAPVADPAA 227
           AY        ES+A +      +  +  ++  P  +   + + +  G+A      +D   
Sbjct: 177 AYGTNSLDNQESAANTSNQNRLFAIAPTYTNGPLTVGLNYHQVKLDGNALIGGAGSDGKL 236

Query: 228 TTYQALSGAYELPDIGLQ--FYGNYVRNSSNLPRVPTAKLASLGVTYNVTPVSNLMFEAM 285
           ++Y  L+G Y+   + L   +  N V  + N        L  +        V    +  +
Sbjct: 237 SSY-TLAGKYDFGVLALSGAYGSNKVEANGNDADKVRNWLIGVSAPIGAKVVLKASYNNL 295

Query: 286 QRKVDDTGRSQLAWTLGYDYYLSKRTVLYARWLRLLNRNGASASLATIAVATDSGNGVRV 345
           + K++D   ++  + +G DY LSKRT LY  + ++ N + A+ ++A    +  SGN    
Sbjct: 296 KDKLNDNADAK-QFAIGADYLLSKRTKLYTAFSKISNDDNAAYTVA--HASGGSGNNESQ 352

Query: 346 LATGIRHNF 354
              GI H+F
Sbjct: 353 FNLGINHSF 361