Pairwise Alignments

Query, 190 a.a., Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12) from Variovorax sp. SCN45

Subject, 204 a.a., Holliday junction branch migration protein RuvA from Vibrio cholerae E7946 ATCC 55056

 Score =  179 bits (454), Expect = 3e-50
 Identities = 92/203 (45%), Positives = 133/203 (65%), Gaps = 15/203 (7%)

Query: 1   MIGKLTGTLAERNPPQVVVDCNGVGYEVDVPMSTFYNLPNVGAKVSLLTHFVVREDAQIL 60
           MIG+L GTL E+ PPQ++++  G+GYEV +PMS  Y LPN+G +  + THFVVREDAQ+L
Sbjct: 1   MIGRLRGTLIEKLPPQILIEVGGIGYEVQMPMSCIYELPNIGEEAIIYTHFVVREDAQLL 60

Query: 61  YGFGTAEERAAFRQLIKITGVGPRTALGLLSGMSVGELAQAITTQELGRLVKIPGIGKKT 120
           YGF T  ERA FR++IK  GVGP+  L +LSGM+  +    +  +++  L+K+PG+GKKT
Sbjct: 61  YGFNTVSERALFREVIKANGVGPKMGLAILSGMTANQFVTCVEKEDISTLIKLPGVGKKT 120

Query: 121 AERLLLELKGKL----GADIGLPAHTAS----------DAQADILQALIALGYSDKEAAL 166
           AERL++E+K +L      D+  PA  A+          +AQ + + AL+ALGY   +A+ 
Sbjct: 121 AERLVVEMKDRLKGWGAGDLFTPATDAAPVDSTPVIAQNAQEEAMSALLALGYKPPQASK 180

Query: 167 ALKALPKDATVSEG-IKLALKSL 188
           A+  + K    SE  I+ ALKS+
Sbjct: 181 AVSQVAKAGMSSEELIREALKSM 203