Pairwise Alignments

Query, 190 a.a., Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12) from Variovorax sp. SCN45

Subject, 203 a.a., Holliday junction branch migration protein RuvA from Klebsiella michiganensis M5al

 Score =  173 bits (438), Expect = 2e-48
 Identities = 92/201 (45%), Positives = 131/201 (65%), Gaps = 14/201 (6%)

Query: 1   MIGKLTGTLAERNPPQVVVDCNGVGYEVDVPMSTFYNLPNVGAKVSLLTHFVVREDAQIL 60
           MIG+L G + E+ PP V+++  GVGYEV +PM+ FY LP+VG +  + THF+VREDAQ+L
Sbjct: 1   MIGRLRGIILEKQPPLVLLETGGVGYEVHLPMTCFYELPDVGKEAIIFTHFIVREDAQLL 60

Query: 61  YGFGTAEERAAFRQLIKITGVGPRTALGLLSGMSVGELAQAITTQELGRLVKIPGIGKKT 120
           YGF   +ER  F++LIK  GVGP+ AL +LSGMS  +   A+  +EL  LVK+PGIGKKT
Sbjct: 61  YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREELAALVKLPGIGKKT 120

Query: 121 AERLLLELKGK---LGADIGLPA----------HTASDAQADILQALIALGYSDKEAA-L 166
           AERL++E+K +   L  D+  PA           +  DA+ + + AL+ALGY  +EA+ +
Sbjct: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPAGPSDDDAEQEAVAALVALGYKPQEASRM 180

Query: 167 ALKALPKDATVSEGIKLALKS 187
             K +  DA     I+ AL++
Sbjct: 181 VSKIVRPDANSETLIREALRA 201