Pairwise Alignments

Query, 190 a.a., Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12) from Variovorax sp. SCN45

Subject, 205 a.a., Holliday junction DNA helicase RuvA (RefSeq) from Shewanella sp. ANA-3

 Score =  178 bits (451), Expect = 7e-50
 Identities = 97/204 (47%), Positives = 133/204 (65%), Gaps = 16/204 (7%)

Query: 1   MIGKLTGTLAERNPPQVVVDCNGVGYEVDVPMSTFYNLPNVGAKVSLLTHFVVREDAQIL 60
           MIG+L G L E+  P+V++D NGVGYE+ +P+++FY LP V    ++ THFVVREDAQ+L
Sbjct: 1   MIGRLRGVLIEKQAPEVLIDVNGVGYELQMPLTSFYELPEVNQPTTVYTHFVVREDAQLL 60

Query: 61  YGFGTAEERAAFRQLIKITGVGPRTALGLLSGMSVGELAQAITTQELGRLVKIPGIGKKT 120
           YGF T +ER+ FR LIK  GVGP+ AL +LSGM+  E    +   ++  LVK+PG+GKKT
Sbjct: 61  YGFITKQERSLFRLLIKANGVGPKLALTILSGMTASEFVGCVERDDIVTLVKLPGVGKKT 120

Query: 121 AERLLLELKGKL----GADIG-----------LPAHTASDAQADILQALIALGYSDKEAA 165
           AERLL+E++ KL     A +G            PA T + A+ D + ALI+LGY   +A+
Sbjct: 121 AERLLVEMRDKLKSLMEASVGSEREFVLQSNYSPAPTVNSAEEDAISALISLGYKPPQAS 180

Query: 166 LALKALPKDATVSEG-IKLALKSL 188
            A+ A  K+   SE  IK ALKS+
Sbjct: 181 KAVSAAYKEGMDSETLIKAALKSM 204