Pairwise Alignments

Query, 357 a.a., Polyhydroxyalkanoic acid synthase from Variovorax sp. SCN45

Subject, 591 a.a., class I poly(R)-hydroxyalkanoic acid synthase from Vibrio cholerae E7946 ATCC 55056

 Score =  116 bits (291), Expect = 1e-30
 Identities = 85/306 (27%), Positives = 150/306 (49%), Gaps = 18/306 (5%)

Query: 38  VGQTPKDEIHRRGTLSLYHYRPLVDELYRVPVLMVMATTNRAYIFDLAPGQSMVEYLLLK 97
           V  TP + + +     L  Y+PL +++   P+L+V    N+ YI DL    SMV +L+ +
Sbjct: 210 VANTPGEVVFKNEVFELIQYKPLTEQVAVTPLLIVPPFINKYYILDLREKNSMVRWLVEQ 269

Query: 98  GYDVYVMDWNAPRPDEKRLRIEDYVLDFIPDSIRRVQEDSGEEDVTVAGYCMGG-VLST- 155
           G+ V+++ W  P   + +L  EDYVL+ +  ++  ++  +G+E +  AGYC+GG VL+T 
Sbjct: 270 GHSVFMISWRNPGAAQAQLNFEDYVLEGVVKAVNAIESITGQEQINAAGYCIGGTVLATT 329

Query: 156 --LYAALHPGGPMKNLALFTTPVDFSRMKLFHAW-SDRRYFDVDRLIDTVGNVPPEMLFA 212
              YAA      +K  + FTT +DFS+     A+ +D     ++   +  G +    L  
Sbjct: 330 IAYYAAKRMKKRIKTASFFTTLLDFSQPGEVGAYINDTIIRAIELQNNAKGYMDGRSLSV 389

Query: 213 SFDMLRPAGRGAGVVQLWDNMDNDEFVKSYRMFD----RWGAEMLPLAGEYFRQTVKELM 268
           +F +LR          L+ N   D ++K     D     W ++   +AG      ++EL 
Sbjct: 390 TFSLLREN-------SLYWNYYVDNYLKGQSPVDFDLLYWNSDSTNVAGACHNFLLRELY 442

Query: 269 WDNKLHKGE-LELGGRPVRLQNIKVPVLHALAQHDHIVPYEAGQPLIAGIGSADKEEVVL 327
            +NKL + + +++GG  + L  IKVP      + DHI  ++         G  +K  V+ 
Sbjct: 443 LENKLVQDKGVKVGGVWIDLDKIKVPSYFISTKEDHIALWQGTYRGALRTG-GNKTFVLG 501

Query: 328 KGGHVS 333
           + GH++
Sbjct: 502 ESGHIA 507