Pairwise Alignments

Query, 542 a.a., Peptide chain release factor 3 from Variovorax sp. SCN45

Subject, 697 a.a., translation elongation factor G (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  164 bits (414), Expect = 1e-44
 Identities = 135/501 (26%), Positives = 230/501 (45%), Gaps = 40/501 (7%)

Query: 4   VAETRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQIAGSVKARKASRHATSDWMEIEKQR 63
           + E  + R   I +H DAGKTT TE++L  +G I   G V        +T+D+M  E +R
Sbjct: 1   MTELSKYRNIGIFAHVDAGKTTTTERILKLTGKIHKIGEVH----DGESTTDFMVQEAER 56

Query: 64  GISVASSVMQMLYRDHVINLLDTPGHKDFSEDTYRVLTAVDSALMVIDAANGVEAQTRRL 123
           GI++ S+ +   ++DH  N++DTPGH DF+ + YR L  +D  + V   + GVE Q+   
Sbjct: 57  GITIQSAAVSCFWKDHRFNVIDTPGHVDFTVEVYRSLKVLDGGIAVFCGSGGVEPQSETN 116

Query: 124 IEVCRQRDTPIITFVNKMDREVREPLDILDEVERELGMPCVPMTWPVGQGKTFRGIMNLR 183
                + +   I FVNK+DR   + L ++ + +  L    + M  P+G    F G+++L 
Sbjct: 117 WRYANESEVARIIFVNKLDRMGADFLRVVKQTKDVLAANPLVMVLPIGIEDEFCGVVDLL 176

Query: 184 TQAMTVFESGSERLPQDFET--IPLSERETLTKRFGADFETAMESME-----LATGASPA 236
           T+   V++     +P++FE   +P +  + + +      ETA+E  +        G  P+
Sbjct: 177 TRKAYVWDDSG--IPENFEVKDVPANMVDLVEEYREMLIETAVEQDDDLLEAYMEGEEPS 234

Query: 237 WD--REAFLAGKQT----PVFFGSGVNNFGVMEVLDALVDLAPSPQSRTSTTLVNRQPVV 290
            +  +     G +T    P F GS   N G+  VLDA+VD  P+P        V+ QP+ 
Sbjct: 235 IEDLKRCIRKGTRTMAFFPTFCGSAFKNKGMQLVLDAVVDYLPAPDE------VDPQPLT 288

Query: 291 KE---------IQPEDKDFAGVVFKVQANMDANHRDRIAFVRMASGKYTPGMKLKVQRTS 341
            E         I   D+    + FK+   MD +    + FVR+ +G+   G  +    T 
Sbjct: 289 DEEGNETGEYAIVSADESLKALAFKI---MD-DRFGALTFVRIYAGRLKKGDTILNSATG 344

Query: 342 KELRPTSVVTFMSQRREAVEEAYAGDIVGFTTHGGVQLGDTITD-GASLQFTGLPFFAPE 400
           K  R   +    +  R  +E A AGDI+       VQ G T+ D         + F  P 
Sbjct: 345 KTERIGRMCEMYANDRIEIESAEAGDIIAIVGMKNVQTGHTLCDVKHPCTLEAMVFPEPV 404

Query: 401 LFMTVILKNPLRTKQLQQGLAQ-LGEEGAIQVFRPEVGGPMLLGAVGQLQFEVVQHRLKA 459
           + + V  K+   ++++   + + + E+ + +V   E  G  +L  +G+L  ++    LK 
Sbjct: 405 ISIAVAPKDKGGSEKMAIAIGKMIAEDPSFRVETDEDSGETILKGMGELHLDIKVDILKR 464

Query: 460 EYDADVRLEGCQYTGARWITA 480
            Y  ++ +   Q      ITA
Sbjct: 465 TYGVELIVGEPQVAYRETITA 485