Pairwise Alignments

Query, 260 a.a., Efflux ABC transporter, permease protein from Variovorax sp. SCN45

Subject, 260 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score = 71.2 bits (173), Expect = 2e-17
 Identities = 70/262 (26%), Positives = 111/262 (42%), Gaps = 20/262 (7%)

Query: 5   AASLSGQARYPASALMLTTGQFLGTGIEVIAVWALFHRFG-EVQGWQLGEVALFYGLVNC 63
           + +++ +  Y  + L+ +     G    +  ++ LF+R G   QGW   E  L  G+   
Sbjct: 13  STAIAAELEYRLNFLLASFSSLGGLAGSLFGLF-LFYRTGYRFQGWSWPEAQLVLGIFTL 71

Query: 64  MFAVADALGRGFDTLGTEFLRTGAFDRLLLRPRPVALQLMGHDFRISRAGRLLQGALVLV 123
           +   +  L         E ++ G  D +LL+P      L             L G +++ 
Sbjct: 72  LQGASATLFVPNLNKIVEQVQQGTLDFVLLKPVSSQFWLSTRSLSPWGIPDFLFGLVLIG 131

Query: 124 FATVQANIAWTPAAIGIALFALAGGAALFLGILVLQGTLSFWTVESLEIANVLTYGGVQA 183
           +A  Q  ++      GI    LA    +   +  + G+LS W V+   +  VL  G V+A
Sbjct: 132 YAGQQLGLSLLDYLQGI--LPLACSLVILYSLWFMMGSLSIWFVKIYNVTEVLR-GLVEA 188

Query: 184 AQYPLALYAQWFRRVLTFIVPLACVAYYPALAILGKPDPLGAPAWMGLVSPLAGFVFLAA 243
            +YP++ Y   FR   TF+VP+A +  +PA A L +  PL    W      L+G  FLA 
Sbjct: 189 GRYPISAYPAGFRIFFTFVVPVAFLTTFPAEAALDR-RPL---FW------LSGAAFLAI 238

Query: 244 AF-----GVWRFGLRHYASTGS 260
           A        WRF LR Y S  S
Sbjct: 239 ALLWLSNRFWRFALRFYTSASS 260