Pairwise Alignments

Query, 416 a.a., Putative drug efflux protein from Variovorax sp. SCN45

Subject, 397 a.a., Permeases of the major facilitator superfamily from Pseudomonas fluorescens FW300-N2E2

 Score =  290 bits (741), Expect = 7e-83
 Identities = 160/381 (41%), Positives = 243/381 (63%), Gaps = 6/381 (1%)

Query: 19  AKPRRLPASVAFPLLAAVLFGFFFAAAAPSPLFVVFQHAWHFSSSLLTVAFAIYAIALLI 78
           ++P    AS+ F  LA  L GF  A++AP+PL+ ++Q    FS ++LT+ F +YA +LL 
Sbjct: 2   SRPASTRASLIF--LALTLLGFLAASSAPTPLYHLYQEQLQFSPAVLTLIFGVYAFSLLA 59

Query: 79  SLLVAGSLSDHIGRRPVVLGALALQAVAMGLFLLAQDIGGLIVARVVQGIATGVASGALS 138
           +LL  GSLSD++GR+PV+  AL L  +AM LF+ A ++  LI AR++QG ATG+A+  L 
Sbjct: 60  ALLTVGSLSDYLGRKPVIFVALLLNMLAMLLFISADNVAWLISARLIQGFATGMATSVLG 119

Query: 139 AAVVEAAPASRKRLGALITSVSPLAGLALGALLTGMAVKFSVQPVMLVFGVLAVVFALGA 198
           AA+++      +R G LITSV+PL G+A GAL  G+  +F+ +P+ L + +L  +F L A
Sbjct: 120 AALLDFD----RRQGPLITSVAPLLGMACGALGCGLLAEFAPRPLQLTYWILLGLFLLQA 175

Query: 199 AVVLWMPETVTRRPGAWASLVPRVSIPARARAEFARGLPVFIAVWALGGLFLSLAPSLML 258
             +  + E+V+ +PGAW SL P + +P +AR      L + +A WA+GG +LSLAPSL+ 
Sbjct: 176 VYIWRLAESVSPQPGAWQSLRPTLHVPIQARRALWLILSLNLAAWAVGGFYLSLAPSLVR 235

Query: 259 HVFGVDNGVVNGLTVAVLSGVGAIAPTLLGRLAAPRPAIVGMASIAAGLVLLLASLATRS 318
              G  + ++ G  VAVL+  GA++   L    A +   +  + +  GL L+L ++   S
Sbjct: 236 AATGSTSNLIGGALVAVLTLTGALSIYTLRNQGADKMLRLAASLLVIGLALVLLAVHGAS 295

Query: 319 LALFFVGTAVAGVGFGGAFSALVQTLAPLAQSHERGELFAAIFVVSYLAFSLPAMLAGFL 378
           L LFFVGT V G GFG  F   ++++ PLA  HER  L +A +V+SYLAFSLP++LAG L
Sbjct: 296 LPLFFVGTLVTGSGFGAGFLGALRSIMPLALPHERAGLMSAFYVLSYLAFSLPSLLAGNL 355

Query: 379 VKPLGLLATVEGYAAVLLLIA 399
            +  GL+ T +GY AVL++++
Sbjct: 356 TRVFGLIPTTDGYGAVLIVLS 376