Pairwise Alignments

Query, 416 a.a., Putative drug efflux protein from Variovorax sp. SCN45

Subject, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 67.8 bits (164), Expect = 6e-16
 Identities = 94/368 (25%), Positives = 153/368 (41%), Gaps = 31/368 (8%)

Query: 61  SSSLLTVAFAIYAIALLISLLVAGSLSDHIGRRPVVLGALALQAVAMGLFLLAQDIGGLI 120
           S + L    A Y I   +S  V G+LSD IGR+P+++  LA+  +   + L A      +
Sbjct: 55  SPAALQAVMACYLIPYGLSQFVYGTLSDRIGRKPIIIAGLAIYIIGSLIALFAHQYSWFL 114

Query: 121 VARVVQGIAT---GVASGALSAAVVEAAPASR-KRLGALITSVSPLAGLALGALLTGMAV 176
           +   VQG+     G  S  LS    E A   +   L ++    SPL    LG  LT  + 
Sbjct: 115 IGSFVQGLGIGCGGAMSRTLSRDCFEGAELHKVNSLISMCLIFSPLVAPVLGGYLT-ESF 173

Query: 177 KFSVQPVMLVFGVLAVVFALGAAVVLWMPETVTRRPGAWASLVPRVSIPARARAEFARGL 236
            +    + L    +AVV  +  ++V  +P T  ++     S    +S        F   L
Sbjct: 174 GWRSSYLFLSLFAIAVVITMMTSMVETLPATARKKEPVLRSYHYVLS-----DRRFQGYL 228

Query: 237 PVFIAVWALGGLFLSLAPSLMLHVFGVDNGVVNGLTVAVLSG--VGAIAPTLLGRLAAPR 294
              +A +A   +F + A  L+  V G+    V+ L V  + G   GA    ++ R    +
Sbjct: 229 ICLVATFAGLAVFEAAAGVLLGGVLGLPATTVSLLFVLPIPGYLAGAWLSNVIARHWREK 288

Query: 295 PAI-VGMASIAAG-LVLLLASLATRSLALFFVGTA-VAGVGFGGAF-SALVQTLAPLAQS 350
            A+ VG+ +I  G LV++L  L   + AL  +G A +  +G G  F +A    L+P    
Sbjct: 289 TAMHVGLLAILTGSLVIMLPGLLGMTTALSLIGGATIYFLGAGILFPAATTGALSPF--P 346

Query: 351 HERGELFAAIFVVSYLAFSLPAMLAGFLVK----PLGLLATVEGYAAVLLLIAVYGVWNQ 406
           +  G   A +  +  L   L  + A         PLG+         ++LL++V  +W  
Sbjct: 347 YHAGTGGAILGGMQNLGAGLATLFAAMFPASDQLPLGI---------IMLLMSVLALWGL 397

Query: 407 WAALRKAP 414
                K P
Sbjct: 398 KRVYTKQP 405