Pairwise Alignments

Query, 416 a.a., Putative drug efflux protein from Variovorax sp. SCN45

Subject, 405 a.a., major facilitator transporter (RefSeq) from Shewanella loihica PV-4

 Score =  159 bits (402), Expect = 1e-43
 Identities = 107/382 (28%), Positives = 182/382 (47%), Gaps = 4/382 (1%)

Query: 23  RLPASVAFPLLAAVLFGFFFAAAAPSPLFVVFQHAWHFSSSLLTVAFAIYAIALLISLLV 82
           RL    AF + A      F  A AP  LF  ++     S++ L +    Y  +   +L+V
Sbjct: 2   RLATGSAFVIAATAFILVFATAGAPISLFNSYRLDDGLSNADLGLVSLGYFFSAATALIV 61

Query: 83  AGSLSDHIGRRPVVLGALALQAVAMGLFLLAQDIGGLIVARVVQGIATGVASGALSAAVV 142
            G LS+ +GR+P+ L AL     +  L L  Q I  L  ARV+QG A G+A+G++ A VV
Sbjct: 62  FGRLSNVVGRKPMALTALLCAVASCCLLLNMQHILVLFAARVLQGFACGIATGSIGAYVV 121

Query: 143 EAAPASRKRLGALITSVSPLAGLALGALLTGMAVKFSVQPVMLVFGVLAVVFALGAAVVL 202
           + +      L A ITS SP+ G++ GA+++G  V ++  P ML+F +L  + ++   + L
Sbjct: 122 DTSRGRPAWLVAAITSTSPMIGISSGAIVSGALVTWAPMPRMLIFILLIAILSICLLLFL 181

Query: 203 WMPETVTRRPG----AWASLVPRVSIPARARAEFARGLPVFIAVWALGGLFLSLAPSLML 258
           + PE++  R      A ASL PR+  PA  +  F     V +A W+LG  + +  PS++ 
Sbjct: 182 FSPESIKARADVHARALASLRPRLYFPAERKWAFLTLAGVVVATWSLGAFYQAFGPSIVA 241

Query: 259 HVFGVDNGVVNGLTVAVLSGVGAIAPTLLGRLAAPRPAIVGMASIAAGLVLLLASLATRS 318
              G ++ ++  L  + +  +  +   L   L   R  ++GM       +++L SL    
Sbjct: 242 EQLGTNSPILAALAFSSVMILTPMGGYLTSGLTPRRAVLLGMLLYIGAALMILVSLDNGW 301

Query: 319 LALFFVGTAVAGVGFGGAFSALVQTLAPLAQSHERGELFAAIFVVSYLAFSLPAMLAGFL 378
           L  F   + + G+  G A +A    L       +R  L +++FV+SY    +P ++A   
Sbjct: 302 LPAFLCASLLVGIAQGAATTACFNVLLAGVTVEQRAGLLSSVFVISYAGAVVPGLVASLA 361

Query: 379 VKPLGLLATVEGYAAVLLLIAV 400
                +     GY  + +  A+
Sbjct: 362 ASSFSVFQICVGYVVLGVAAAI 383