Pairwise Alignments

Query, 416 a.a., Putative drug efflux protein from Variovorax sp. SCN45

Subject, 396 a.a., multidrug efflux system protein MdtL (RefSeq) from Shewanella sp. ANA-3

 Score = 64.7 bits (156), Expect = 5e-15
 Identities = 70/293 (23%), Positives = 129/293 (44%), Gaps = 19/293 (6%)

Query: 65  LTVAFAIYAIALLISLLVAGSLSDHIGRRPVVLGALALQAVAMGLFLLAQDIGGLIVARV 124
           L +AF++Y   +  ++L AGSL+D IGR+P+ L +  L A+A      +Q     +VAR 
Sbjct: 40  LHIAFSVYLAGMATTMLFAGSLADRIGRKPITLFSALLFALASYFAARSQSSDLFLVARF 99

Query: 125 VQGIATGVASGALSAAVVEAAPASRKRLGAL-----ITSVSPLAGLALGALLTGMAVKFS 179
           VQG+  G     ++ A++  A   ++R   L     +T + P+    +G L+    ++F 
Sbjct: 100 VQGVGAGCCY-VVAFAILRDALDDKRRAKVLSMVNGVTCIIPVIAPVIGHLI---MLRF- 154

Query: 180 VQPVMLVFGVLAVVFALGAAVVLWMPETVTRRPGAWASLVPRVSIPARARAEFARGLPVF 239
             P   +F  +AV+  L   + L++      +    +  +PRV   +  +  F   + + 
Sbjct: 155 --PWPSLFYTMAVMGLLVFGLCLFVLRETYSKASFHSQTLPRVQTESFKQGFFISRVVIT 212

Query: 240 IAVWALGGLFLSLAPSLMLHVFGVDNGVVNGLTVAVLSGVGAIA----PTLLGRLAAPRP 295
                    +++++P L++   G D G  +  T+A+ + V  +A    P LL +      
Sbjct: 213 TLGVTTILSYVNVSPMLIMGQMGFDRGQYSN-TMAMTALVSMLASFSTPFLLNQFKEKSL 271

Query: 296 AIVGMASI-AAGLVLLLASLATRSLALFFVGTAVAGVGFGGAFS-ALVQTLAP 346
            +       AA LV +L  L         +G  +   GF   F   + Q L+P
Sbjct: 272 ILFSQTLFAAAALVFILTQLGWLGQLFNLLGFGLVCSGFAIGFGVTMSQALSP 324