Pairwise Alignments

Query, 370 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

Subject, 363 a.a., Leu or Leu/Val/Ile transport binding protein from Sinorhizobium meliloti 1021

 Score = 92.0 bits (227), Expect = 2e-23
 Identities = 89/344 (25%), Positives = 155/344 (45%), Gaps = 20/344 (5%)

Query: 1   MKKTFTSCAVAFLLATGAPAVSAQILIGQSADLSGPVAASVKETIMGSQLVIDAVNAQGG 60
           M+  FT+ A+AF LA+ +    A++LIG +  +SG +A +  +   G+++ +  +NA GG
Sbjct: 1   MRHLFTAAALAFALASQS---EAEVLIGVAGPMSGKLAWTGTQLRRGAEMAVANINAAGG 57

Query: 61  INGEQIEVIRMDDGLDAKRSLENTRVLIEDKKVVALLLNRGTPNTLAVIPLLDKY---GV 117
           + G+Q+ +I  DD  D +++L     L+ D  V  +    G   + A IP    Y   GV
Sbjct: 58  VLGQQVRLIVADDFCDPRQALAAAEKLVADGAVFVI----GHYCSGASIPASKIYAAAGV 113

Query: 118 ALVGPSTGAMALHKPLQKNIFNVRSTYQREAEKAVQHL-QTTGIQRIAVVQADDSFGKDA 176
             + PS+    L +    N+F V S    +  KA  +L    G  +IA++  + ++GK  
Sbjct: 114 LQISPSSTNPMLTEQGHANVFRVCSRDDAQGHKAGNYLADHWGDSKIAILHDNTTYGKGL 173

Query: 177 MEGANKGFEKAGLKPVVVALADRNKPDYGAIVPQLTKSNAQAVLWIGS-GTAVTDGIKAL 235
            +   K     G+   V       K DY   V  L  ++  AVL++G   T     ++A 
Sbjct: 174 ADETKKQLNMRGVTEAVYQSYTPGKDDYSVEVAALQTAHI-AVLYLGGYHTEAALMVRAA 232

Query: 236 RAAGSAAQIITLSNNAASGFIKELGSASAGVIITQVLPYERAMGHPLIKEAATLAKAKGQ 295
           R      Q+I+  + A   F    G A+ G + T V    R       + A  + + + +
Sbjct: 233 RDRAYPVQLISGDDTATEAFGLIAGPAAEGTLFTFVADPRRN-----AEAAEVVERFRAE 287

Query: 296 N-ELSPALLEGFVATKVMVEALRRTGPKPTRAKLIATLNNFQYD 338
           N E     L  + A ++  +A+ +      +A +IA L   Q+D
Sbjct: 288 NFEPDSWTLHSYGAAEIWAQAVTKANSLDLQA-VIAALREDQFD 330