Pairwise Alignments

Query, 370 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

Subject, 406 a.a., ABC transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

 Score = 75.5 bits (184), Expect = 2e-18
 Identities = 83/350 (23%), Positives = 152/350 (43%), Gaps = 21/350 (6%)

Query: 17  GAPAVSAQILIGQSADLSGPVAA-SVKETIMGSQLVIDAVNAQGGINGEQIEVIRMDDGL 75
           G      +I IGQ+   SGP +A  V+  +  +   +  VNA+GG+NG +I++I +DD  
Sbjct: 28  GPGVTDTEIKIGQTMPYSGPASAYGVQGHVEDAYYTM--VNAKGGVNGRKIKLISLDDAY 85

Query: 76  DAKRSLENTRVLIEDKKVVALLLNRGTPNTLAVIPLLDKYGVALVGPSTGAMALHKPLQK 135
              +++E TR L+E ++V+A++   GTP   A+   L+   V  +  STGA     P  K
Sbjct: 86  SPPKTVEQTRKLVEQEEVLAIIGTIGTPTNTAIQKYLNAKKVPQIFISTGAAKWDDP--K 143

Query: 136 NI---FNVRSTYQREAEKAVQH-LQTTGIQRIAVVQADDSFGKDAMEGANKGF-EKAGLK 190
           N      +   YQ E     ++ L+     ++ V   +D  GKD ++G   G  +KA   
Sbjct: 144 NFPWTTQLYPPYQMEGMIFAKYLLKHKPDAKLGVFSQNDDAGKDYVKGLKDGLGDKAKTM 203

Query: 191 PVVVALADRNKPDYGAIVPQLTKSNAQAVLWIGSGTAVTDGIKALRAAG-SAAQIITLSN 249
            V     +   P   + +  L  S A  +  + +       I+ +          +   +
Sbjct: 204 IVKEVTYEVTDPTVDSQIVALKASGADTLFTMATPKFGAQAIRKVHELNWKPLNFVVSVS 263

Query: 250 NAASGFIKELGSASAGVIITQVLPY----ERAMGHPLIKEAAT-LAKAKGQNELSP-ALL 303
           ++  G ++  G  ++  ++T +        R      +KE    LAK   + +++  + +
Sbjct: 264 SSIKGVLEPAGKEASTGLLTALAAKTPTDPRFENDADVKEFKDFLAKWYPKGDIADGSTV 323

Query: 304 EGFVATKVMVEALRRTGPKPTRAKLIATLNNFQYD----LGPGLDISYSP 349
            G+++  + V+ L   G   TR  L+    N +      L PG+ IS  P
Sbjct: 324 TGYISAYMTVKVLEACGDNLTRDNLLKQATNIKPTAAPLLLPGIKISTRP 373