Pairwise Alignments

Query, 370 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

Subject, 411 a.a., ABC transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

 Score = 79.0 bits (193), Expect = 2e-19
 Identities = 87/350 (24%), Positives = 152/350 (43%), Gaps = 23/350 (6%)

Query: 25  ILIGQSADLSGPVAASVKETIMG--SQLVIDAVNAQGGINGEQIEVIRMDDGLDAKRSLE 82
           I IG     SGP +A    +I+G   Q     +N QGGING QIE I  DDG +  +++E
Sbjct: 42  IRIGNLMPYSGPASAY---SIVGRIEQAYFKMINDQGGINGRQIEFISYDDGYNPAKAVE 98

Query: 83  NTRVLIEDKKVVALLLNRGTPNTLAVIPLLDKYGVALVGPSTGAMALHKPLQ-KNIFNVR 141
             R L+E  +V+ +    GTP+  A+   L+   V  +  +TGA     P         +
Sbjct: 99  QVRKLVERDEVLLVFSAMGTPSNAAIQKYLNLKQVPQLFAATGATRFGDPKAFPWTMGWQ 158

Query: 142 STYQREAEKAVQH-LQTTGIQRIAVVQADDSFGKDAMEGANKGF-EKAGLKPVVVALADR 199
             YQ E     ++ L T    RIAV+  +D  G+D ++G   G  ++A     +    + 
Sbjct: 159 PPYQTEGRVYAKYILATKPAARIAVLYQNDDLGRDLLKGLKDGLGDRAAAMIALEESYEV 218

Query: 200 NKPDYGAIVPQLTKSNAQAVLWIGSGTAVTDGIKALRAAG-SAAQIITLSNNAASGFIKE 258
            +P     V ++  S A   + I +       I+A          +  L + + +  ++ 
Sbjct: 219 TEPSVDNHVARMKASGADVFVSITTPKFAAQSIRAAATLDWHPLYVQALVSASIAAVLRP 278

Query: 259 LGSASAGVIITQVLPYERAMGHPLIKE--------AATLAKAKGQNELSPALLEGFVATK 310
            G  +A  +++    Y +    P  ++        A   A A   +    +++ G+ A +
Sbjct: 279 AGLDAAQGLVSAA--YNKDAADPQWRDDPGMKRFHAFLDAYAPDVDRGDNSVVYGYGAAQ 336

Query: 311 VMVEALRRTGPKPTRAKLI---ATLNNFQYD-LGPGLDISYSPTDHTGIE 356
            +VE L R G   +RA ++   A+L ++  D L PG+ ++ +  D   IE
Sbjct: 337 CLVEVLSRAGDDLSRANIMKQAASLQDYAPDTLLPGIAVNTAADDFHPIE 386