Pairwise Alignments

Query, 178 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 192 a.a., 2'-5' RNA ligase family protein from Caulobacter crescentus NA1000

 Score =  120 bits (302), Expect = 1e-32
 Identities = 67/171 (39%), Positives = 98/171 (57%), Gaps = 5/171 (2%)

Query: 5   LFFALLPGAQDAATIAALGERMNFQHALKGTVVEAHRLHVTLFDLGEYADVPRDKVEQAM 64
           L F L P  + A  IA    R+     L G +++  RLH+TL  LG+YA +P D V +  
Sbjct: 21  LMFLLYPDRRTAERIALEAARLKRASGLAGPLLQTGRLHITLHHLGDYAGLPNDIVSKGR 80

Query: 65  AAAATLPPPEFDVVFDEAMSYAK---NQALVLYGDDTGVEALMAFRQRLGEALADAGFKP 121
            A   +    F+VVFD A S+A    N    L G + G++ L+AF++ LGE +A A  +P
Sbjct: 81  FAGDAVEAGAFEVVFDRAASFANRSGNNPFTLQGGE-GIQPLIAFQKALGEKMAGAALRP 139

Query: 122 KRSFTPHMTLLYARRKLEKHAIEEPVRWSAGKLALIDSHVGQGVHEVLGQW 172
            RSFTPH+TLLY R+ + + AI  P+ W+  + AL+ S +G+  H VL +W
Sbjct: 140 DRSFTPHITLLYDRQVMPEQAI-TPISWTVSRFALVQSKLGRTQHIVLREW 189