Pairwise Alignments

Query, 306 a.a., Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) from Variovorax sp. SCN45

Subject, 516 a.a., 2-isopropylmalate synthase from Vibrio cholerae E7946 ATCC 55056

 Score = 46.6 bits (109), Expect = 1e-09
 Identities = 65/293 (22%), Positives = 114/293 (38%), Gaps = 33/293 (11%)

Query: 6   QVRIVDVGPRDGLQNEKQPVSAEVKIGLVHRLQDAGLKEIEVTSFVSPKWVPQMADNAEV 65
           QV I D   RDG Q     ++ + K+ + + L+  G+  IE    VS        D   V
Sbjct: 4   QVIIFDTTLRDGEQALSASLTVKEKLQIAYALERLGVDIIEAGFPVSSP-----GDFESV 58

Query: 66  MHGIRRKPGVRYSVLTPNM-KGFEAAIAAPREEWPDEIVVFGAASEAFSQKNINCSIAES 124
               +     R   L+  + K  +AA  A +      I  F + S    Q  +  S    
Sbjct: 59  QTIAKNIKNSRVCALSRAVAKDIDAAAEALKVAEAFRIHTFISTSTIHVQDKLRRS---- 114

Query: 125 IERFAPVVAAALEKGIAVRGAMSCT----VGCPYEGEIAPAKVGYLAQLMKGIGVQRVDV 180
              +  VVA A++   AV+ A   T      C   G      +  + +     G + +++
Sbjct: 115 ---YDDVVAMAVK---AVKHARQYTDDVEFSCEDAGRTPIDNLCRMVEAAINAGARTINI 168

Query: 181 ADTIGVGTPRKVQAAMDAT---LAHFGVDAISGHFHDTYGQALVNTLAALELGVWNFQSS 237
            DT+G   P +    +      + +     IS H HD  G ++ N++AA++ G    + +
Sbjct: 169 PDTVGYTVPSEFGGIIQTLFNRVPNIDKAIISVHCHDDLGMSVANSIAAIQAGARQVEGT 228

Query: 238 SAGLGGCPYAKGATGNVATEDVVYMLHG----MGIETGIDLDRLIDAGVYISE 286
             G+G         GN A E++  ++      +G+ TGI  D +      +S+
Sbjct: 229 INGIG------ERAGNCALEEIAMIIKTRQELLGVTTGIKHDEISRTSKLVSQ 275