Pairwise Alignments

Query, 306 a.a., Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) from Variovorax sp. SCN45

Subject, 538 a.a., alpha-isopropylmalate/homocitrate synthase family transferase from Sinorhizobium meliloti 1021

 Score = 56.6 bits (135), Expect = 1e-12
 Identities = 78/307 (25%), Positives = 124/307 (40%), Gaps = 34/307 (11%)

Query: 6   QVRIVDVGPRDGLQNEKQPVSAEVKIGLVHRLQDAGLKEIE-----VTSFVSPKWVPQMA 60
           ++ + D   RDG Q      S E KI +   L   G+  +E          +  +  +  
Sbjct: 5   RIYLFDTTLRDGQQTPGIDFSVEDKIAIASLLDQFGMDYVEGGYPGANPTDTEFFKCRRT 64

Query: 61  DNAE-VMHGIRRKPGVRYSVLTPNMKGFEAAIAAPREEWPDEIVVFGAASEAFSQKNINC 119
           D A  V  G+ ++ GV  S    N  G  A ++A      D I +   + +   +  + C
Sbjct: 65  DKASFVAFGMTKRAGVSAS----NDPGLSALLSAKS----DAICLVAKSWDYHVEVALGC 116

Query: 120 SIAESIERFAPVVAAALEKGIAVRGAMSCTVGCPYEGEIAPAKVGYLAQLMKGI---GVQ 176
           +  E+++     V A +  G   R AM   V C +  +   A   Y     K     G +
Sbjct: 117 TNEENLDNIRASVEAVVASG---REAM---VDCEHFFDGYKANSAYALACAKTAFEAGAR 170

Query: 177 RVDVADTIGVGTPRKVQAAMDATLAHFGVDAISG-HFHDTYGQALVNTLAALELGVWNFQ 235
            V + DT G   P +++  + A +A     A  G H H+  GQA+ N+LAA+E GV   Q
Sbjct: 171 WVVLCDTNGGTQPPEIREIVSAVIAEGVPGANLGIHAHNDTGQAVANSLAAVEAGVRQIQ 230

Query: 236 SSSAGLGGCPYAKGATGNVATEDVVYML---HGMGIETGIDLDRLID---AGVYISEALG 289
            +  G+G     +    N+ T      L   +    ETGID +RL +         E L 
Sbjct: 231 GTLNGIG----ERCGNANLVTLIATLALKETYSSRFETGIDAERLQELTKLAHAFDELLN 286

Query: 290 REPNSRA 296
           R P+ +A
Sbjct: 287 RSPDPQA 293