Pairwise Alignments

Query, 306 a.a., Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) from Variovorax sp. SCN45

Subject, 514 a.a., 2-isopropylmalate synthase from Methanococcus maripaludis S2

 Score = 60.5 bits (145), Expect = 8e-14
 Identities = 73/299 (24%), Positives = 120/299 (40%), Gaps = 30/299 (10%)

Query: 1   MKLPTQVRIVDVGPRDGLQNEKQPVSAEVKIGLVHRLQDAGLKEIEVTSFVSPKWVPQMA 60
           MKLP +VR+ D   RDG Q     +  + K+ +   L + G+  IE    VS +   +  
Sbjct: 18  MKLPEKVRVFDTTLRDGEQTPGVSLMPDQKMDIAKNLSEIGVDAIEAGFPVSSEGEQESI 77

Query: 61  DNAEVMHGIRRKPGVRYSVLTPNMKGFEAAIAAPREEWPDEIVVFGAASEAFSQKNINCS 120
            N   +       G+  +V     K  + AI    +   D I  F A S    +  +  S
Sbjct: 78  KNITSLGLDAEICGLARAV----KKDIDVAI----DCGVDSIHTFIATSPLHREYKLKMS 129

Query: 121 IAESIERFAPVVAAALEKGIAVRGAMSCTVGCPYEGEIAPAKVGYLAQLMK---GIGVQR 177
             + I+     +    E G+ V  +           +    ++ YL ++ K     G  R
Sbjct: 130 KEKIIDIAVESIEYIKEHGVIVEFSAE---------DATRTELDYLKEVYKKAVEAGADR 180

Query: 178 VDVADTIGVGTPRKVQAAMDATLAHFGVDAISGHFHDTYGQALVNTLAALELGVWNFQSS 237
           ++V DT+GV  P  +   +        V  IS H H+ +G A+ N++AA+E G      +
Sbjct: 181 INVPDTVGVMVPNSMSYLIKELKNDIKV-PISVHCHNDFGIAVSNSVAAVEAGAEQVHCT 239

Query: 238 SAGLGGCPYAKGATGNVATEDVVYMLHGM-GIETGIDLDRLIDAGVYISEALG--REPN 293
             GLG         GN + E+ V  L+ + GI T ++   L      +S   G   +PN
Sbjct: 240 VNGLG------ERAGNASLEETVMTLNMVYGINTNVNTKMLTKLSKLVSHYTGIKTQPN 292