Pairwise Alignments

Query, 306 a.a., Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) from Variovorax sp. SCN45

Subject, 492 a.a., 2-isopropylmalate synthase from Methanococcus maripaludis S2

 Score = 57.0 bits (136), Expect = 9e-13
 Identities = 70/282 (24%), Positives = 117/282 (41%), Gaps = 42/282 (14%)

Query: 7   VRIVDVGPRDGLQNEKQPVSAEVKIGLVHRLQDAGLKEIEVTSFVSPKWVPQMAD----- 61
           V I D   RDG Q     +S   K+ L  +L + G+  IE  S ++ K   +        
Sbjct: 2   VNIFDTTLRDGEQTPGVSLSPSEKLELAIKLDELGVNIIEAGSAITSKGEREAMKLVTGQ 61

Query: 62  --NAEVMHGIRRKPGVRYSVLTPNMKGFEAAIAAPREEWPDEIVVFGAASEAFSQKNINC 119
             NAE+   +R  P              +AA++       D + +    S+      +  
Sbjct: 62  NLNAEISSFVRALP-----------VDIDAALSCD----VDSVHLVVPTSDIHMTYKLRK 106

Query: 120 SIAESIERFAPVVAAALEKGIAVRGAMSCTVGCPYEGEIAPAKVGYLAQL-MKG--IGVQ 176
           S  E+++     V  A + G+ V  +           +   + V +L +L +KG  +   
Sbjct: 107 SREENLKDAMHAVEYAKDHGLIVELSAE---------DATRSDVEFLKELFLKGEELKAD 157

Query: 177 RVDVADTIGVGTPRKVQAAMDATLAHFGVDAISGHFHDTYGQALVNTLAALELGVWNFQS 236
           R+ V DT+G+ TP K    +  T+ +     +S H H+ +G A  NTL+A+  G      
Sbjct: 158 RICVCDTVGILTPLKA-IDLIKTMKNTIKIPVSIHCHNDFGMATANTLSAISAGADQCHV 216

Query: 237 SSAGLGGCPYAKGATGNVATEDVVYMLHGM-GIETGIDLDRL 277
           +  G+G         GN + E+VV  L  +  IETGID ++L
Sbjct: 217 TINGIG------ERAGNASLEEVVMSLKSLYDIETGIDTEKL 252