Pairwise Alignments

Query, 342 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 347 a.a., AraC family transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  159 bits (402), Expect = 1e-43
 Identities = 107/332 (32%), Positives = 170/332 (51%), Gaps = 13/332 (3%)

Query: 11  RAVTPMAFVRAIVQGYERYGVDPAEALKAAQITPRELARPGARVTAAQFEALSEHAMQEL 70
           R + P  F+   ++   R+GVD    L  A + P  +  P   V+A Q+ A      Q +
Sbjct: 4   RMIAP-CFMDDTLECLRRHGVDAGPLLAQAGL-PSIVTGP---VSANQYGAFWHAVAQAM 58

Query: 71  DDEALGWFSRRLPWGSYGMLCRASLTSPDLGVAIKRWCRHHRLLTDDIGLALEVAGGVAT 130
           DDE  G  +R +  GS+ +LC A L++  L  A++R  R  R++ ++    L V  G+A 
Sbjct: 59  DDEFFGEGARPMRAGSFALLCHAILSTATLEHALRRALRFLRVVLENPHGELVVENGLAQ 118

Query: 131 LRITENRPLDDAF--REFCLVTSLRFMHGYMCWAIDSRISLRSASFPFAAPPHSDAYAPM 188
           + + +      AF  R F ++     +HG  CW I  R+ +R   F  +APP    Y   
Sbjct: 119 IVLKDAGATRSAFAYRTFWII-----LHGVNCWLIGRRLPIRWVDFRCSAPPAGTDYRLF 173

Query: 189 FTPEVRFDAPQAGISFDERYLALPLQRDERALRTMLKRALPLTILQYRRDRLLGQRVREL 248
           F   V FD  +  + FD  YL LP  RDERAL+  L+ A    +++YR D  L   +R+ 
Sbjct: 174 FGAPVHFDQRRTRLVFDAEYLKLPPIRDERALKHFLRHAPANILVRYRHDAGLSAAIRQR 233

Query: 249 LRSRASEATTA-EALAGLLNVSGRTLHRQLHEEGTSLQTLKNEVRHELAVELLRRTTRPI 307
           L + A  A    EA+A  + ++  TL R+L +EG + +++K ++R  LA+E L      +
Sbjct: 234 LHATAPSAWPGFEAIAARMRIAAPTLRRRLRQEGQTYRSIKEDLRRALAMEALADGRTNV 293

Query: 308 KQVALAVGFRNEKSFSRAFLQWTGHAPRDFRQ 339
            Q+A+ +GF    +F RAF +WTG +P  FR+
Sbjct: 294 AQLAVELGFSEPSAFHRAFRKWTGKSPAQFRR 325