Pairwise Alignments

Query, 627 a.a., Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) from Variovorax sp. SCN45

Subject, 645 a.a., phosphomethylpyrimidine synthase from Vibrio cholerae E7946 ATCC 55056

 Score =  837 bits (2162), Expect = 0.0
 Identities = 413/636 (64%), Positives = 497/636 (78%), Gaps = 38/636 (5%)

Query: 12  SLTREPFPASHKCLIPGSRPDLNVPVRDVRLTN--------------GETVSLYDTSGPY 57
           +L+ EP+P S K  + GSRPD+ VPVR++ L++               E + +YDTSG Y
Sbjct: 17  TLSVEPYPNSQKSYLLGSRPDIRVPVREITLSDTLVGGSKDAPIFEPNEPICVYDTSGVY 76

Query: 58  TDPKVEIDVRRGLPDVRGAWVVERGDTESYEGRTHHALDDGAKNEDRDAQRLAELRAGAS 117
           TDP  +ID+ +GLP +R  W+ ER DT      + H   +   +E  D  R   L     
Sbjct: 77  TDPSHDIDLYKGLPKLREEWIEERRDTHILPSMSSHFARERLADETLDELRYGHLP---- 132

Query: 118 ALQRQPRRAKSGANVTQMHYARRGIVTPEMEYVALRENGKREWMAEYLANEERA--KRVM 175
               + RRA     VTQ+HYAR+GI+TPEME+VA+REN +R      LA+++ +  ++  
Sbjct: 133 ----RIRRAMGQHRVTQLHYARQGIITPEMEFVAIRENSRR------LAHQDPSLLQQHA 182

Query: 176 GNPMGASIPRIITPEFVRDEVARGRAIIPANINHPEVEPMAIGRNFKVKINANIGNSAVT 235
           G   GA +P +ITPEFVR E+A GRAIIP NINHPE EPM IGRNF VK+NANIGNS+V+
Sbjct: 183 GQNFGAHLPDLITPEFVRREIAEGRAIIPCNINHPESEPMIIGRNFLVKVNANIGNSSVS 242

Query: 236 SSIEEEVEKLVWAIRWGADNVMDLSTGKNIHTTRDWIVRNSPVPIGTVPIYQALEKVGGV 295
           SSIEEEVEKLVWA RWGAD VMDLSTG+NIH TR+WI+RNSPVPIGTVP+YQALEKV GV
Sbjct: 243 SSIEEEVEKLVWATRWGADTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVNGV 302

Query: 296 AEDLTWEIYRDTLIEQAEQGVDYFTIHAGLRLPFIHLTADRMTGIVSRGGSIMAKWCIAH 355
           AE+LTWE+ RDTL+EQAEQGVDYFTIHAGL L ++ +TA R+TGIVSRGGSI+AKWC++H
Sbjct: 303 AENLTWEVMRDTLLEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCLSH 362

Query: 356 HKESFLYTHFEDICDIMKAYDVSFSLGDGLRPGSGADANDEAQFAELRTLGELTQIAWKH 415
           H+E+FLYTHF +IC+I   YDV+ SLGDGLRPGS ADANDEAQFAELRTLGELTQIAW++
Sbjct: 363 HQENFLYTHFREICEICAQYDVALSLGDGLRPGSIADANDEAQFAELRTLGELTQIAWEY 422

Query: 416 DVQTMIEGPGHVPMHMIQSNMDEQLKHCHEAPFYTLGPLTIDIAPGYDHIASAIGAAMIG 475
           DVQ MIEGPGHVPMH+I++NMDEQLKHCHEAPFYTLGPLT DIAPGYDHI S IGAAMIG
Sbjct: 423 DVQVMIEGPGHVPMHLIKANMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAMIG 482

Query: 476 WAGTAMLCYVTPKEHLGLPDRDDVKQGIIAYKIAAHAADVAKGHPGARSRDDALSKARFE 535
           W G AMLCYVTPKEHLGLP+++DVK G+I YK+AAHAAD+AKGHPGA+ RD+ALSKARFE
Sbjct: 483 WFGCAMLCYVTPKEHLGLPNKEDVKTGLITYKLAAHAADLAKGHPGAQIRDNALSKARFE 542

Query: 536 FRWQDQFNLGLDPDTAREFHDETLPKDSSKVAHFCSMCGPKFCSMKITQEVREYAAKKG- 594
           FRW+DQFNL LDP TAR FHDETLP++S KVAHFCSMCGPKFCSMKI+QEVR+YA  +  
Sbjct: 543 FRWEDQFNLALDPVTARAFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYANNQTL 602

Query: 595 -------VAEAEAMTEGMEEKSKEFMAGGGEIYIPI 623
                  V  AE++   M++KS+EF+A G E+Y P+
Sbjct: 603 DTTVIDLVMPAESIQLAMQDKSREFLASGAELYHPL 638