Pairwise Alignments

Query, 376 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

Subject, 379 a.a., 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) from Pseudomonas stutzeri RCH2

 Score =  478 bits (1231), Expect = e-140
 Identities = 242/375 (64%), Positives = 291/375 (77%)

Query: 1   MLLNADQEAIRDAVRDFSQAELWPNAPKWDREHSFPKEAHQGLAALGAYGICVPEEHGGA 60
           ML N DQ AI +  R F+Q  L P A +W REH +P EA   +AALG +G+ VPE+ GG+
Sbjct: 1   MLPNEDQNAIAEMARQFAQERLKPFAEQWSREHRYPAEAIGEMAALGFFGMLVPEQWGGS 60

Query: 61  GLDYLTLALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGNAQQKKQWLEPLAQGKMLGA 120
              YL  A+ LEEIAAGDG  ST +SV N      ++R+GN QQK  +L PLA+G+ +GA
Sbjct: 61  DTGYLAYAMALEEIAAGDGACSTIMSVHNSVGCVPILRFGNEQQKSDFLTPLARGEQIGA 120

Query: 121 FCLTEPQAGSDASSLRTTARKDGDAYVIDGVKQFITSGKNGQVAIVIAVTDKGAGKRGMS 180
           F LTEPQAGSDASSLRT AR+DGD YV++G KQFITSGK+    IV AVTD  AGK G+S
Sbjct: 121 FALTEPQAGSDASSLRTRARRDGDHYVLNGAKQFITSGKHAGTVIVFAVTDPDAGKGGIS 180

Query: 181 AFLVPTDAPGYNVARLEDKLGQHSSDTAQINFDGCRIPVENLIGAEGEGYKIALGALEGG 240
           AF+VPTD+PGY V R+EDKLGQH+SDT QI F+  R+PV N +G EGEGY+IAL  LEGG
Sbjct: 181 AFIVPTDSPGYQVVRVEDKLGQHASDTCQIAFEDLRVPVANRLGEEGEGYRIALANLEGG 240

Query: 241 RIGIAAQSVGMARSAFDVALAYAKERQAFGGSIFDQQAVGFRLAECATQLEAARQLIWHA 300
           RIGIAAQ+VGMAR+AF+ A  YA++R+ FG  I + QAV FRLA+ ATQ+  ARQ++ HA
Sbjct: 241 RIGIAAQAVGMARAAFEAARDYARDRETFGKPIIEHQAVAFRLADMATQIAVARQMVHHA 300

Query: 301 AALRDAGRPCLKEAAMAKLFASEMAERVCSAAIQTLGGYGYVNDFPLERIYRDVRVCQIY 360
           AALR+ GRP L EA+MAKLFASEMAE+VCSAAIQTLGGYGY+ DFP+ERIYRDVRVCQIY
Sbjct: 301 AALREVGRPALVEASMAKLFASEMAEKVCSAAIQTLGGYGYLADFPVERIYRDVRVCQIY 360

Query: 361 EGTSDIQKLLIQRAL 375
           EGTSDIQ+L+I R L
Sbjct: 361 EGTSDIQRLVISRNL 375