Pairwise Alignments

Query, 376 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

Subject, 380 a.a., acyl-CoA dehydrogenase from Sinorhizobium meliloti 1021

 Score =  308 bits (789), Expect = 2e-88
 Identities = 167/374 (44%), Positives = 243/374 (64%), Gaps = 3/374 (0%)

Query: 3   LNADQEAIRDAVRDFSQAELWPNAPKWDREHSFPKEAHQGLAALGAYGICVPEEHGGAGL 62
           L+ +QEAIR    DF++ E+ P+A  WD++  FP E  +  AALG  GI + ++ GG GL
Sbjct: 5   LSEEQEAIRTMALDFARDEIAPHAVDWDQQKHFPVETLRAAAALGMAGIYIRDDVGGTGL 64

Query: 63  DYLTLALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGNAQQKKQWLEPLAQGKMLGAFC 122
             L  A+++E +A G    ++ +S+ N     I  RYG  +Q+++ L PL    +L ++C
Sbjct: 65  TRLDAAMIIEALATGCPAIASFVSIHNMCAGMI-DRYGTDEQRRRLLPPLLTMDVLASYC 123

Query: 123 LTEPQAGSDASSLRTTARKDGDAYVIDGVKQFITSGKNGQVAIVIAVTDKGAGKRGMSAF 182
           LTEP +GSDA++L+T A ++GDAY++ G KQFI+      + IV+A T +  G +G+SAF
Sbjct: 124 LTEPGSGSDAAALKTRAVREGDAYLLTGQKQFISGAGESGLYIVMARTGE-EGPKGISAF 182

Query: 183 LVPTDAPGYNVARLEDKLGQHSSDTAQINFDGCRIPVENLIGAEGEGYKIALGALEGGRI 242
           +V  DAPG      E K+G H+  T  +  D  R+ VEN +GAEGEG++IA+  L+GGR+
Sbjct: 183 VVEKDAPGLTFGANEKKMGWHAQPTRAVMLDNVRVSVENRLGAEGEGFRIAMAGLDGGRL 242

Query: 243 GIAAQSVGMARSAFDVALAYAKERQAFGGSIFDQQAVGFRLAECATQLEAARQLIWHAAA 302
            IAA S+G A+SAFD ALAY +ER+AFG +I + QA+ FRLA+ AT LE AR  +W AA 
Sbjct: 243 SIAAASLGGAQSAFDKALAYVQERRAFGKAIGEFQALQFRLADMATDLEIARTFLWRAAC 302

Query: 303 LRDAGRP-CLKEAAMAKLFASEMAERVCSAAIQTLGGYGYVNDFPLERIYRDVRVCQIYE 361
             DA  P   K  AMAK F ++    V + A+Q  GGYGY+ D+ +E+I RD+RV QI E
Sbjct: 303 ALDAADPEATKLCAMAKRFVTDRCFSVANDALQLHGGYGYLADYGVEKIVRDLRVHQILE 362

Query: 362 GTSDIQKLLIQRAL 375
           GT++I +L++ RA+
Sbjct: 363 GTNEIMRLIVSRAI 376