Pairwise Alignments

Query, 376 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

Subject, 381 a.a., acyl-CoA dehydrogenase, short-chain specific from Caulobacter crescentus NA1000

 Score =  292 bits (748), Expect = 9e-84
 Identities = 157/374 (41%), Positives = 242/374 (64%), Gaps = 3/374 (0%)

Query: 3   LNADQEAIRDAVRDFSQAELWPNAPKWDREHSFPKEAHQGLAALGAYGICVPEEHGGAGL 62
           LN DQ AI+DA R F++ +L P++  WD    FP +  +  A LG  GI V E+ GG+GL
Sbjct: 7   LNEDQVAIQDAARAFAEGQLAPHSADWDENKHFPVDVLRQAAELGFAGIYVNEDVGGSGL 66

Query: 63  DYLTLALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGNAQQKKQWLEPLAQGKMLGAFC 122
             L  +++ E ++ GD   +  +++ N   + ++ R+G+   ++++L  L   +++ ++C
Sbjct: 67  SRLDASIIFEALSYGDVPVAAYLTIHNM-ASWMIDRFGSDDLRQRYLPRLTTMELIASYC 125

Query: 123 LTEPQAGSDASSLRTTARKDGDAYVIDGVKQFITSGKNGQVAIVIAVTDKGAGKRGMSAF 182
           LTEP +GSDA+++RTTA+ DGD YV++G K FI+ G    + +V+A T  G G +G+SAF
Sbjct: 126 LTEPGSGSDAAAMRTTAKLDGDHYVLNGGKAFISGGGVSDIYVVMARTG-GEGAKGVSAF 184

Query: 183 LVPTDAPGYNVARLEDKLGQHSSDTAQINFDGCRIPVENLIGAEGEGYKIALGALEGGRI 242
           +V     G +    E K+G ++  TAQ+NFD CR+PV N IG EGEG++ A+  L+GGR+
Sbjct: 185 VVEKGMEGLSFGANERKMGWNAQPTAQVNFDNCRVPVANRIGQEGEGFRFAMMGLDGGRL 244

Query: 243 GIAAQSVGMARSAFDVALAYAKERQAFGGSIFDQQAVGFRLAECATQLEAARQLIWHAAA 302
            IA+ S+G A+ A D A AY + R  FG  + D QA+ F+LA+ AT+LEAAR ++  AA 
Sbjct: 245 NIASCSLGGAQFALDTAKAYLETRNQFGRPLKDFQALQFKLADMATELEAARLMVRRAAH 304

Query: 303 LRDAGRP-CLKEAAMAKLFASEMAERVCSAAIQTLGGYGYVNDFPLERIYRDVRVCQIYE 361
             D+  P   K  AMAK FA++   +V + A+Q  GGYGY+ D+PLER+ RD+RV QI E
Sbjct: 305 ALDSKHPEATKLCAMAKRFATDAGFQVANDALQLHGGYGYLQDYPLERLVRDLRVHQILE 364

Query: 362 GTSDIQKLLIQRAL 375
           GT++I +++I R +
Sbjct: 365 GTNEIMRVIIAREM 378