Pairwise Alignments

Query, 394 a.a., 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Variovorax sp. SCN45

Subject, 396 a.a., 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) (from data) from Shewanella oneidensis MR-1

 Score =  452 bits (1164), Expect = e-132
 Identities = 231/393 (58%), Positives = 291/393 (74%), Gaps = 2/393 (0%)

Query: 1   MSESIVIVGLARTPMGSFQGDFSSLSAHDLGGAAIKAAVERAGIAPDSVGEVLFGNCLMA 60
           +++ IVIV   RTPMGSFQG  S +++  L   AIKA +    +APD V EVL G  L A
Sbjct: 6   LNQEIVIVAAKRTPMGSFQGSLSGITSLSLAATAIKALLADTQVAPDKVDEVLMGCVLPA 65

Query: 61  GQGQAPARQAAYKGGLPDSAGAVTLSKMCGSAMKAAMLSHDLLLAGTHDVIVAGGMESMT 120
           G GQAPARQA    GLP S GA T++K+CGS MK  ML+HDL+ AG+  V++AGGMESM+
Sbjct: 66  GLGQAPARQATLGAGLPLSVGATTVNKVCGSGMKTVMLAHDLIKAGSAKVVIAGGMESMS 125

Query: 121 NAPYLMLKGRGGYRMGHDRIFDHMMLDGLEDAYQPGRSMGTFGEDCAAKYKFTREQQDAF 180
            APYL+ K R G RMGH ++ DHM LDGLEDAY  G +MGTF +  A ++  TREQ DAF
Sbjct: 126 QAPYLLDKARAGIRMGHGKVLDHMFLDGLEDAYTGG-AMGTFAQKTADEFGITREQMDAF 184

Query: 181 AIASVERAKKATETGLFKDEIVPVTVKGRGGDTVISVDEGPGKVKLDKIPTLKPAFKKEN 240
           A++S+E+A  A  +G FK EIVPVTV  R GD  I  DE PG  + +KIPTL+PAF K+ 
Sbjct: 185 ALSSLEKANAAINSGAFKTEIVPVTVSDRRGDVTIDTDEQPGNARPEKIPTLRPAFAKD- 243

Query: 241 GTITAASSSSINDGAAALVMMTESHAKKIGARPIARIVGHATHAQQPEWFSTAPVGAVAK 300
           GTITAA+SSSI+DGAAAL++ T ++A+++G   +A I GH THAQ+P  F+TAPVGA+AK
Sbjct: 244 GTITAANSSSISDGAAALMLTTRANAEQLGLTVLATIKGHTTHAQEPALFTTAPVGAMAK 303

Query: 301 LFKKTGWAVKDVDLWEVNEAFAVVPMALMHELDVSHEIVNVHGGACALGHPIGASGARIM 360
           L    GW+  +VDL+E+NEAFA+V M  + EL +    VNV+GGACALGHPIG SGAR++
Sbjct: 304 LLSNVGWSKDEVDLFEINEAFAMVTMLAVSELGLDMTKVNVNGGACALGHPIGCSGARLL 363

Query: 361 VTLIHALKARGKKRGVATLCIGGGEGTAVALEL 393
           VTLIHALKARG KRGVA+LCIGGGE TA+A+E+
Sbjct: 364 VTLIHALKARGLKRGVASLCIGGGEATAMAIEV 396