Pairwise Alignments

Query, 306 a.a., Pseudouridine synthase (EC 4.2.1.70), PA2043 type from Variovorax sp. SCN45

Subject, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

 Score = 90.5 bits (223), Expect = 8e-23
 Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 19/208 (9%)

Query: 95  VVFRDDQLLVVDKPPFLPVTPTGKYLQQSLLVRLKRKL-ELDDLVPLHRIDRSTSGLVLF 153
           +V++DD ++VV+KP      P G ++  S+L RLK +  + + +  LHR+D STSGL++F
Sbjct: 358 IVYQDDAIVVVNKPAEFLSVP-GVHVHDSVLTRLKAQFTQAEGVFALHRLDMSTSGLLVF 416

Query: 154 SVRPETRGAYQAMFPERRIDKHYEAVVPWQDGVSSVPATYRSRL---VDDEHFMRVREEP 210
           ++        Q  F  R + K Y A++  +  +S      +  L   +DD    +V  + 
Sbjct: 417 ALTRRANKQLQKQFISRAVQKRYVALI--EGKLSETQGEIQLPLCGDLDDRPRQKVCWQQ 474

Query: 211 GEPNSETHIELLAAQGGHALLKLSPVTGRKHQLRVHCQ---ALGMPIVNDPIYPVLLPEN 267
           G+P + TH E +  +     + L P TGR HQLRVHC     L  PIV D +Y +     
Sbjct: 475 GKP-ALTHWETVQVEQNRTRVYLYPHTGRTHQLRVHCAHHLGLNAPIVGDDLYGLQ---- 529

Query: 268 TDDFDKPLQLLAKSVAFIDPITGEQRRF 295
               DK L L A+ ++F  P T +   F
Sbjct: 530 ----DKRLFLHAEQLSFAHPYTKQPMTF 553