Pairwise Alignments

Query, 306 a.a., Pseudouridine synthase (EC 4.2.1.70), PA2043 type from Variovorax sp. SCN45

Subject, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

 Score = 76.3 bits (186), Expect = 7e-19
 Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 22/202 (10%)

Query: 95  VVFRDDQLLVVDKPPFL---PVTPTGKYLQQSLLVRLKRKLELDDLVPLHRIDRSTSGLV 151
           V++ D+ ++  +KP  L   P  P   Y   S+  RL       D+  +HR+D STSGL+
Sbjct: 16  VIYEDEHIIAANKPSGLLSVPGRPVEHY--DSMWARLVDYCP--DVKVVHRLDMSTSGLI 71

Query: 152 LFSVRPETRGAYQAMFPERRIDKHYEA----VVPWQDGVSSVP--ATYRSRLVDDEHFMR 205
           LF+       A +  F  R   K Y A    V+   +G  ++P    + +R      F  
Sbjct: 72  LFAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRPKQKVCFEE 131

Query: 206 VREEPGEPNSETHIELLAAQGGHALLKLSPVTGRKHQLRVHCQALGMPIVNDPIYPVLLP 265
            R+      S T  +++  +    +++L P+TGR HQLRVH Q+LG PIV D +Y    P
Sbjct: 132 GRD------SLTRYQVVKREEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLY---AP 182

Query: 266 ENTDDFDKPLQLLAKSVAFIDP 287
               +F   LQL A  + F  P
Sbjct: 183 PEAVEFADRLQLHAAELCFYHP 204