Pairwise Alignments

Query, 306 a.a., Pseudouridine synthase (EC 4.2.1.70), PA2043 type from Variovorax sp. SCN45

Subject, 543 a.a., ribosomal large subunit pseudouridine synthase D from Synechococcus elongatus PCC 7942

 Score = 79.0 bits (193), Expect = 2e-19
 Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 19/206 (9%)

Query: 90  PFEEQVVFRDDQLLVVDKPPFLPVTPTGKYLQQSLLVRLKRKL--ELDDLVPLHRIDRST 147
           P E  +++ D  LL + KP  L   P  + LQQ+  ++L R+   +L     +HR+D++T
Sbjct: 335 PLELPILYEDADLLAIIKPAGLLSVPGTRGLQQASAIQLLRQQFPDLPTYCVVHRLDQAT 394

Query: 148 SGLVLFSVRPETRGAYQAMFPERRIDKHYEAVVPWQDGVSSVPATYRSRLVDD---EHFM 204
           SG++L +    T+ A    F  R++ K YEA++  Q   ++   T    L  D     + 
Sbjct: 395 SGILLVARNRPTQVALFEQFRRRQVHKVYEALLEGQPDCTA--GTIDLPLRPDWTRRPYQ 452

Query: 205 RVREEPGEPNSETHIELLAAQGGHALLKLSPVTGRKHQLRVHC---QALGMPIVNDPIYP 261
            V  + G P + T+   +   G    ++L P+TGR HQLRVH    + LG PI+ D +Y 
Sbjct: 453 LVDRDRGRP-ALTYYRCIDQTGDRCRMELEPITGRTHQLRVHMAHPEGLGQPILGDDLY- 510

Query: 262 VLLPENTDDFDKPLQLLAKSVAFIDP 287
               +++D     L L A+S+ F  P
Sbjct: 511 ---GQSSD----RLYLHARSIRFRHP 529