Pairwise Alignments

Query, 306 a.a., Pseudouridine synthase (EC 4.2.1.70), PA2043 type from Variovorax sp. SCN45

Subject, 225 a.a., pseudouridylate synthase (RefSeq) from Shewanella amazonensis SB2B

 Score = 82.0 bits (201), Expect = 1e-20
 Identities = 64/207 (30%), Positives = 105/207 (50%), Gaps = 13/207 (6%)

Query: 95  VVFRDDQLLVVDKPPFLPVTPTGKYLQQ-SLLVRLKRKLELDDLVPLHRIDRSTSGLVLF 153
           ++ +D  ++V++KP  L   P    +   S   R+K +     +V  HR+D +TSG++++
Sbjct: 17  ILHQDKDIIVINKPSGLLSVPGRDPIHHDSAWSRIKAEHPNSQVV--HRLDMATSGVMVY 74

Query: 154 SVRPETRGAYQAMFPERRIDKHYEAVVPWQDGVSSVPATYRSRLVDD---EHFMRVREEP 210
           ++R       +  F +R   K Y A V    G      +    L+ D       +V  E 
Sbjct: 75  ALRKSAEVELKRQFRDRETHKTYFARVA---GHVKANCSVDLPLICDWPNRPRQKVDHEI 131

Query: 211 GEPNSETHIELLAAQGGHALLKLSPVTGRKHQLRVHCQALGMPIVNDPIYPVLLPENTDD 270
           G+P S TH+++++      L+KL+P+TGR HQLRVH  ALG PI+ D  Y   L ++  D
Sbjct: 132 GKP-SLTHVDVISYGKRSTLVKLTPITGRSHQLRVHMMALGHPILGDGFYADPLAKSLAD 190

Query: 271 FDKPLQLLAKSVAFIDPITGEQRRFTS 297
               L L A S++F  P +GE   F++
Sbjct: 191 ---RLLLHAASLSFTHPYSGEAMTFST 214