Pairwise Alignments

Query, 306 a.a., Pseudouridine synthase (EC 4.2.1.70), PA2043 type from Variovorax sp. SCN45

Subject, 343 a.a., ribosomal large subunit pseudouridine synthase C from Phaeobacter inhibens DSM 17395

 Score = 66.6 bits (161), Expect = 8e-16
 Identities = 66/232 (28%), Positives = 98/232 (42%), Gaps = 33/232 (14%)

Query: 95  VVFRDDQLLVVDKPPFLPV---TPTGKY---LQQSLLVRLKRKLELDDLVPLHRIDRSTS 148
           V+++DD ++V++KP  L V   + T K+   L  +L    + K  L     +HR+D+ TS
Sbjct: 89  VIYKDDAVIVLNKPAGLAVQGGSGTTKHVDGLSAALQFDAEEKPRL-----VHRLDKDTS 143

Query: 149 GLVLFSVRPETRGAYQAMFPERRIDKHYEAVV-----PWQDGVSS--VPATYRSRLVDDE 201
           G+++ +       +  A F  R   K Y A+V     P+   +    V A    +  + E
Sbjct: 144 GVLVLARTRLAAQSLTAAFRHRATRKIYWALVAGVPTPYLGEIKCGLVKAPGHGKSGEGE 203

Query: 202 -----HFMRVREEPGEPNSETHIELLAAQGGHAL-LKLSPVTGRKHQLRVHCQALGMPIV 255
                H   V   PG   S TH   L      A  + + P+TGR HQLR H   +G PI 
Sbjct: 204 KMIAIHSNEVDSTPGAKRSHTHYATLYRVASRAAWVAMEPITGRTHQLRAHMAEIGHPIA 263

Query: 256 NDPIYPVLLPENTDD---------FDKPLQLLAKSVAFIDPITGEQRRFTSP 298
            D  Y     EN  D           K L L  + +AF  P T +    T+P
Sbjct: 264 GDGKYGGSSQENLGDGWGAQLGGIISKKLHLHCRRMAFEHPTTKKPLSITAP 315