Pairwise Alignments

Query, 268 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 297 a.a., nitrate ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 83.6 bits (205), Expect = 5e-21
 Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 4/186 (2%)

Query: 65  LLVTLKITVLSFLLATVAGVLISFLFVQSKRIETALFPYAVLLQVTPIVAVAPLIIIWVK 124
           +  +L+   L + +A   GV +  L  QS      L P   +L+  P +A  PL +   +
Sbjct: 103 VFASLQRVALGYAMAAAVGVALGTLVGQSALAMRGLDPIFQVLRTVPPLAWLPLSLAAFQ 162

Query: 125 NPVAAMTVCAALVALFPIISNTTLGLRSIDPDLQSYFKLNRATRWQQLVRLRIPSALPYF 184
           +   +      + A++PII NT +G+R+I  D Q+  K+ R   ++   ++ +P+A PY 
Sbjct: 163 DGTPSAIFVIFITAIWPIIINTAVGIRNIPQDYQNVAKVLRLNSFEYFGKIMLPAAAPYI 222

Query: 185 FGGLRISSGLALIGAVVAEFVAGTGGSGAGLAYQILQAGFQLNIPRMFAALLLISLTGVA 244
           F GLRI  GL+ +  V AE + G    G G+ + I  A     I  +  AL+ + + G  
Sbjct: 223 FTGLRIGIGLSWLAIVAAEMLIG----GVGIGFFIWDAWNSSLISDIIVALIYVGIVGFL 278

Query: 245 LFVLMA 250
           L  L+A
Sbjct: 279 LDRLIA 284