Pairwise Alignments

Query, 268 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 281 a.a., aliphatic sulfonate ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 89.0 bits (219), Expect = 1e-22
 Identities = 62/224 (27%), Positives = 114/224 (50%), Gaps = 10/224 (4%)

Query: 24  VVLVALWQWMVVAMELPAYLVPSPYLMMQTLVTDWAPLGNALL----VTLKITVLSFLLA 79
           +  +ALWQ    A  +   + PS   ++  L T  +  G ALL    ++L+ +  +F+ A
Sbjct: 43  IAFLALWQAASTAGWINPAVFPSVGAILSALWTGIS--GGALLDDIAISLQRSGTAFVGA 100

Query: 80  TVAGVLISFLFVQSKRIETALFPYAVLLQVTPIVAVAPLIIIWVKNPVAAMTVCAALVAL 139
            V  + +  L  Q + IE AL P   L + T  +A+ P+ I+ +    A+         L
Sbjct: 101 VVLAIPLGLLMGQVRAIENALDPVLQLFRQTSALALYPVFILLLGLGEASKVFVIFWATL 160

Query: 140 FPIISNTTLGLRSIDPDLQSYFKLNRATRWQQLVRLRIPSALPYFFGGLRISSGLALIGA 199
           FP++ +T  G++ +D  L    ++  A+R     R+ +P A+P  F GLR+S+  AL+  
Sbjct: 161 FPLLLSTISGVKEVDSKLIEMARVYGASRLTVFRRVVLPGAVPSIFVGLRLSATTALLLL 220

Query: 200 VVAEFVAGTGGSGAGLAYQILQAGFQLNIPRMFAALLLISLTGV 243
           + +E +    G+  G+ +Q++ A +   IP MFAA+ +++  G+
Sbjct: 221 IASEMI----GANKGIGFQVMNAQYNFQIPLMFAAIFILAGLGL 260