Pairwise Alignments

Query, 563 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  203 bits (517), Expect = 1e-56
 Identities = 156/548 (28%), Positives = 253/548 (46%), Gaps = 34/548 (6%)

Query: 24  SLPHMFEEAFGRYADRPFSVCMERWMSFG--ELDTLSKALGAWLQSRGLEPGARVAIMLP 81
           ++   FE+   +  DR F V  +R + F   E D  +  L   L   G++ G  + I   
Sbjct: 7   TIGEFFEKQAQKDPDREFLVYPDRNLRFTYKEFDERTDLLAKGLLEIGIKKGDHIGIWAR 66

Query: 82  NIPQFAVTMCGVLRAGYTCVNVNPLYTARELEHQLKDSGATAIVILENFAST--LEKVIE 139
           N+P +   M    + G   V VN  Y + EL + +K S   A+ I+++F     LE + E
Sbjct: 67  NVPDWLTFMFATAKIGVVLVTVNTAYKSHELAYVMKQSDMKALAIIDSFRDVNYLEILYE 126

Query: 140 RTPVKHVVMTSMGDLLGGLYGAWITIAVRHLAKIVPPYKLPLSDGRSVTPFTQAITEGR- 198
             P          +L     G   +    +L  ++    +     R +   T+ +  G  
Sbjct: 127 LVP----------ELKTSQRGKLNSEEFPYLKNVI---YVGQEKHRGMYNTTELMLLGNY 173

Query: 199 --GRPLGPDQSTLDS--IAFLQYTGGTTGLSKGAVLTHRNIVAATLQAEAWFTPALTRAG 254
                L   +  LDS  +  +QYT GTTG  KG +LTH+NI+        ++     +  
Sbjct: 174 VSDEKLIEAKKGLDSDDVINMQYTSGTTGFPKGVMLTHKNILN-----NGYYIGEKQKFT 228

Query: 255 DLSKVNSIAALPLYHIFALTLCLLAIRQGSHMTLIPNPRDFNKFIAVLKKRPFHMLPAVN 314
           +  ++     +PL+H F + L +LA+       ++    D    +A ++K     +  V 
Sbjct: 229 EEERL--CLPVPLFHCFGIVLGVLALLTHGGTLVMLEIFDPLLVLAAIQKEKCTAVYGVP 286

Query: 315 TLFNALLMHPEFKSLDFSTLFVS-QAGGMAASEGTARKWFETTGCPMIEGWGMSETCAIG 373
           T+F A   HP F+  D S+L     AG     E   +   +     +   +G++E   + 
Sbjct: 287 TMFIAEFSHPMFEMFDLSSLRTGIMAGSTCPIEAMKKVMSDMYMREITISYGLTEASPVF 346

Query: 374 TNNPVSNT--EFTGTIGLPLPSIEIAIKDDE-GNSLPVGESGELCIRGPNVMVGYYNQPA 430
           T   V +   +   ++G  +P  E+ I D E G +L  G  GE+C RG NVM GYY  P 
Sbjct: 347 TMTSVDDPFEKRVESVGKAMPHCEVKIIDPETGETLAPGNVGEICCRGYNVMKGYYKMPE 406

Query: 431 ETAAAFTADGFMRTGDIAVMQEDGYSRIVDRKKDMILVSGFNVFPNELENVISLCPGVVE 490
           +TA     DG++ +GD+AV  EDGY +IV R KDMI+  G N++P E+E  +   PG+ +
Sbjct: 407 KTAEVIEKDGWLHSGDLAVEDEDGYYKIVGRIKDMIIRGGENIYPREIEEFLYTMPGIND 466

Query: 491 CAAVGVPDEKQGEAIKVFVVRRDP-ALTEDAVLQYCHSQLTGYKRPKHIEFRESLPKTNV 549
              VG+PDEK GE +  FV+ ++   + E+ V  +   ++  YK PKH+   E  P T  
Sbjct: 467 AQVVGIPDEKYGEIVGAFVIPKEGYEIKEEDVRDFALEKIARYKVPKHVFVVEEFPMTAS 526

Query: 550 GKILRREL 557
           GKI + +L
Sbjct: 527 GKIQKFKL 534