Pairwise Alignments

Query, 747 a.a., RTX toxin transporter, ATP-binding protein from Variovorax sp. SCN45

Subject, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  302 bits (773), Expect = 4e-86
 Identities = 195/694 (28%), Positives = 353/694 (50%), Gaps = 15/694 (2%)

Query: 29  LIALCTIARFHQIAADASLLSHQLGLASSEPINTATLLGAAKHLGLKAKSSRTTLDRLSL 88
           L +L  ++R++ +A     L + L LA  + +       +A+  GL AK +R  LD++  
Sbjct: 6   LNSLVYVSRYYGLANSPEALINGLPLADGK-LTPFLFPRSAERAGLIAKENRAPLDQIPH 64

Query: 89  TPLPALAVLRDESGQERFVILAQCDAQRVLLQDPSSSNGRPVIEPLEVFAAHWTGELILI 148
              P + +L+   G E  V+ +     +      + S   PV   L    A + G   ++
Sbjct: 65  LVFPVVLLLK---GGEACVLNSINQETQEAEIVTAESGLVPVAYSLSDLEAMYIGRYFMV 121

Query: 149 TSRASLAGD----LAKFDFSWFIPSLVKHRKLLGEVLFISFILQLFALVSPLFFQVVMDK 204
             +          L   D  WF  ++ K + +  +VL  S ++ LFA+ +P+F ++V DK
Sbjct: 122 KKQFRFDERSPEVLKPRDGHWFWSTIYKSKHIYRDVLIASLLINLFAVAAPMFSRIVYDK 181

Query: 205 VLVHRGLTTLDVLVIGLLVVVVFESLLNGLRSYVFSHTTNRIDVELGARLFRHLVQLPLA 264
           V+ +    TL VL  G+LV+ +F+ +   LRSY       + D+ + ++LF  ++ + + 
Sbjct: 182 VVPNLAFETLWVLSSGILVIFLFDFVFKMLRSYFIDVAGKKSDILISSKLFSKVMGIRM- 240

Query: 265 YFQAR--RVGDSVARVRELENIRSFLTGNALTVLLDVVFSIVFVAVMLFYSVPLTLIVLA 322
             +AR   VG     ++E E+IR F T   ++ L+D+ F+++F+ ++   +  L  + + 
Sbjct: 241 --EARPPSVGAFARHLQEFESIREFFTSATISSLIDLPFALLFLVLIWLMAGHLVWVPVI 298

Query: 323 SMPLYFGLSLAVVPILRSRLDEKFARGAENQAMLVETVSAIQTVKATALEPAFGRRWDNQ 382
            + +    S  +   L+  ++E     ++  A L+E+++ ++TVK    +  F  RW+  
Sbjct: 299 GVLILVIYSFLIQSRLKRAIEEGSRLASQKYANLIESLAGLETVKLFGAQGQFQYRWEEA 358

Query: 383 LAAYISASFRTQNLASWANEGVNLIGKLVNAATLWYGAHLVMNNDLTVGQFVAFNMFAQR 442
           +A   + + +++ +          + +  N   +  G +L+ N DLT+G  +A  M + R
Sbjct: 359 VAHMANWNIKSRRITDSIQNTAGFVQQAANIGMIIVGVYLISNGDLTMGGLIAATMLSGR 418

Query: 443 VSQPIMRMAQLWTDFQQTGISMARLGDILNTRTEVPPSTA-AQLPALKGRVTLDNLTFRY 501
              P+++++ L T + Q   SM  +  +++   E          P ++G++ LD +TF Y
Sbjct: 419 AIGPLVQLSLLSTRYNQAKSSMTIIEQVMSMPDEQEEGKRYIHRPIIQGKIELDRVTFHY 478

Query: 502 RPEAAPVLNGVSLDVRPGEVIGIVGRSGSGKSTLTKLIQRLYAPEQGRLLVDGIDISLID 561
                  +  +SL + PGE + I+GR GSGK+TL +LI  LY P +G + +D  DIS + 
Sbjct: 479 PNSPIASVRDLSLTIHPGEKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLH 538

Query: 562 AAQLRMQVGVVLQENTLFNRSVRENIAIVDPAAPLEAIIHAAQLAGAHEFISELPEGYDT 621
              +R  +G V Q++ LF  S+R+NI +  P +    ++ AA  AG   F  + P G + 
Sbjct: 539 HIDIRRNIGCVPQDSVLFYGSIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGLER 598

Query: 622 MVGEQGASLSGGQRQRIAIARALFTHPRVLIFDEATSALDYESEAIVQRNMAHICRGRTV 681
            VGE G  LSGGQRQ ++IARA    P VL+ DE TSA+D  SE  +++ ++ +    T+
Sbjct: 599 QVGEGGMLLSGGQRQSVSIARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKPSETL 658

Query: 682 FIIAHRLSAVRHANRIIVMDKGKIV-EGGTHESL 714
            +I H+ S +   +R+IVM+KG I+ +G  HE L
Sbjct: 659 ILITHKTSMLDVVDRVIVMEKGCIIADGPKHEVL 692