Pairwise Alignments

Query, 501 a.a., Two-component sensor PilS from Variovorax sp. SCN45

Subject, 789 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  104 bits (259), Expect = 1e-26
 Identities = 79/245 (32%), Positives = 130/245 (53%), Gaps = 12/245 (4%)

Query: 252 RRRAEELLR-----LGQVARLNALGELSAGLAHELNQPLTAVLANAQAARRLLDDEPP-D 305
           R+RAE  L+     L Q A++  +G+    LAHELNQPL+A+ A   +AR  L++ P   
Sbjct: 541 RQRAEAHLKKTQGELIQAAKMAVVGQTMTSLAHELNQPLSAMSAYLFSARLALEEAPQAQ 600

Query: 306 LSTAREAMGHAVEQARCAANVVGRLRRVIERPEAAGEAKPLVLQDVVRSAMHLLAPEFGR 365
           L+T+ + + +  E+      +V  LR    +  +    +P+ L  VV  A+ L+  +  R
Sbjct: 601 LATSLDHIENLTERM---GKIVNSLRHFARKNSSDESLQPVRLNSVVEQALVLVQTKAKR 657

Query: 366 RAIVTQFDPTAQAPVRVQAEAVALEQIVHNLLMNALQALELVPAGDRRLVIAVGRNGEEG 425
           + I  +   T    + V A+A++LEQ++ NL++N   A         +L IA+G      
Sbjct: 658 QQI--KLINTLPDDLMVMADALSLEQVLINLIVNGCDASTTFAQPWVKL-IALGTEQGMQ 714

Query: 426 VLTVTDNGRGIAPEALPRLFEPFFSTREGGLGLGLSLSETLASGMGGSLSAANASPRGAR 485
            + V D+G+G   E + +LF PF +T+E GLGLGLS+ ++L   M G ++ A+   +GA 
Sbjct: 715 RIAVIDSGQGFEHEVVDKLFTPFTTTKEVGLGLGLSICQSLVEKMQGRIALASNLEKGAM 774

Query: 486 FTLLL 490
             L L
Sbjct: 775 VILEL 779