Pairwise Alignments

Query, 335 a.a., ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

Subject, 441 a.a., nitrate transport protein from Sinorhizobium meliloti 1021

 Score = 43.9 bits (102), Expect = 8e-09
 Identities = 55/201 (27%), Positives = 81/201 (40%), Gaps = 11/201 (5%)

Query: 115 GSSHGGCVRLVGAKS-AGVSDLASLKGK---VIGVSDIASPGKNFFSILLAKNGIDADKD 170
           G   GG   L  AK+ A V   A   GK    +GV+   S     F   LA  GID D+D
Sbjct: 140 GGLGGGEDALKNAKALAAVIRSAGAAGKPPLTLGVTYPFSSHNYEFRYWLAAGGIDPDRD 199

Query: 171 VTWRQYPADLLDVAVKKGEIQAIADGDPNVYLIEKRNQGAYVELASNLSGEYKDKVCCIV 230
           V     P  +   A+  G I     G P   +  +R  G  V    ++     +KV   +
Sbjct: 200 VKLVVVPPPMTSDALAAGAIDGFCVGAPWNMVASERGVGRIVATKQDIWPSAPEKV---I 256

Query: 231 GARGELVRKDKATVAALVRAIAQASSYVAENPNES--ARLFAKYSPNVAVEDL--RALLG 286
           G R E    ++ TV+ LV A+ +A+ +  E  N    A + A+     A  D+  R L G
Sbjct: 257 GMRPEWAEANRDTVSRLVVALDRAARWSDEPANRGRLAEVLAEERHVAAPADIIRRVLAG 316

Query: 287 TLTHQHHPLGRALRDEVEFYA 307
                     R + + + F+A
Sbjct: 317 EFAIDPEGNRRVVENYLVFHA 337